Molecular pathological epidemiology: new developing frontiers of big data science to study etiologies and pathogenesis

被引:87
作者
Hamada, Tsuyoshi [1 ,2 ]
Keum, NaNa [3 ]
Nishihara, Reiko [1 ,2 ,3 ,4 ,5 ]
Ogino, Shuji [1 ,2 ,4 ,6 ,7 ]
机构
[1] Dana Farber Canc Inst, Dept Med Oncol, 450 Brookline Ave,Room SM1036, Boston, MA 02215 USA
[2] Harvard Med Sch, 450 Brookline Ave,Room SM1036, Boston, MA 02215 USA
[3] Harvard TH Chan Sch Publ Hlth, Dept Nutr, Boston, MA USA
[4] Harvard TH Chan Sch Publ Hlth, Dept Epidemiol, Boston, MA USA
[5] Harvard TH Chan Sch Publ Hlth, Dept Biostat, Boston, MA USA
[6] Brigham & Womens Hosp, Div MPE Mol Pathol Epidemiol, Dept Pathol, Boston, MA 02215 USA
[7] Dana Farber Canc Inst, Dept Oncol Pathol, Boston, MA 02115 USA
基金
美国国家卫生研究院;
关键词
Colorectal neoplasms; Drug therapy; Immunology; Microbiology; Personalized therapy; COLORECTAL-CANCER RISK; BODY-MASS INDEX; ISLAND METHYLATOR PHENOTYPE; BETA-CATENIN ALTERATIONS; LIFE-STYLE FACTORS; PHYSICAL-ACTIVITY; ASPIRIN USE; MICROSATELLITE INSTABILITY; FUSOBACTERIUM-NUCLEATUM; BREAST-CANCER;
D O I
10.1007/s00535-016-1272-3
中图分类号
R57 [消化系及腹部疾病];
学科分类号
100201 [内科学];
摘要
Molecular pathological epidemiology (MPE) is an integrative field that utilizes molecular pathology to incorporate interpersonal heterogeneity of a disease process into epidemiology. In each individual, the development and progression of a disease are determined by a unique combination of exogenous and endogenous factors, resulting in different molecular and pathological subtypes of the disease. Based on "the unique disease principle," the primary aim of MPE is to uncover an interactive relationship between a specific environmental exposure and disease subtypes in determining disease incidence and mortality. This MPE approach can provide etiologic and pathogenic insights, potentially contributing to precision medicine for personalized prevention and treatment. Although breast, prostate, lung, and colorectal cancers have been among the most commonly studied diseases, the MPE approach can be used to study any disease. In addition to molecular features, host immune status and microbiome profile likely affect a disease process, and thus serve as informative biomarkers. As such, further integration of several disciplines into MPE has been achieved (e.g., pharmaco-MPE, immuno-MPE, and microbial MPE), to provide novel insights into underlying etiologic mechanisms. With the advent of high-throughput sequencing technologies, available genomic and epigenomic data have expanded dramatically. The MPE approach can also provide a specific risk estimate for each disease subgroup, thereby enhancing the impact of genome-wide association studies on public health. In this article, we present recent progress of MPE, and discuss the importance of accounting for the disease heterogeneity in the era of big-data health science and precision medicine.
引用
收藏
页码:265 / 275
页数:11
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