Characterization of a novel β-glucosidase-like activity from a soil metagenome

被引:32
作者
Jiang, Chengjian [1 ]
Ma, Gefei [1 ]
Li, Shuangxi [1 ]
Hu, Tingting [1 ]
Che, Zhiqun [1 ]
Shen, Peihong [1 ]
Yan, Bing [2 ]
Wu, Bo [1 ]
机构
[1] Guangxi Univ, Coll Life Sci & Technol, Guangxi Key Lab Subtrop Bioresources Conservat &, Key Lab,Minist Educ Microbial & Plant Genet Engn, Guangxi 530004, Peoples R China
[2] Guangxi Inst Oceanol, Guangxi Key Lab Marine Biotechnol, Guangxi 536000, Peoples R China
关键词
uncultured soil microorganisms; function-based screening strategy; beta-glucosidase; UNCULTURED MICROORGANISMS; MOLECULAR-CLONING; IDENTIFICATION; CELLULASES; DIVERSITY; GENOMICS; GENES; PURIFICATION; BACTERIA; ECOLOGY;
D O I
10.1007/s12275-009-0024-y
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
We report the cloning of a novel beta-glucosidase-like gene by function-based screening of a metagenomic library from uncultured soil microorganisms. The gene was named bgllC and has an open reading frame of 1,443 base pairs. It encodes a 481 amino acid polypeptide with a predicted molecular mass of about 57.8 kDa. The deduced amino acid sequence did not show any homology with known beta-glucosidases. The putative beta-glucosidase gene was subcloned into the pETBlue-2 vector and overexpressed in E. coli Tuner (DE3) pLacI; the recombinant protein was purified to homogeneity. Functional characterization with a high performance liquid chromatography method demonstrated that the recombinant BgllC protein hydrolyzed d-glucosyl-beta-(l-4)-d-glucose to glucose. The maximum activity for BgllC protein occurred at pH 8.0 and 42A degrees C using p-nitrophenyl-beta-d-glucoside as the substrate. A CaCl2 concentration of 1 mM was required for optimal activity. The putative beta-glucosidase had an apparent K (m) value of 0.19 mM, a V (max) value of 4.75 U/mg and a k (cat) value of 316.7/min under the optimal reaction conditions. The biochemical characterization of BgllC has enlarged our understanding of the novel enzymes that can be isolated from the soil metagenome.
引用
收藏
页码:542 / 548
页数:7
相关论文
共 32 条
[1]  
[Anonymous], 2012, Molecular Cloning: A Laboratory Manual
[2]   Microbial β-glucosidases:: Cloning, properties, and applications [J].
Bhatia, Y ;
Mishra, S ;
Bisaria, VS .
CRITICAL REVIEWS IN BIOTECHNOLOGY, 2002, 22 (04) :375-407
[3]   Analysis of broad-scale differences in microbial community composition of two pristine forest soils [J].
Chatzinotas, A ;
Sandaa, RA ;
Schönhuber, W ;
Amann, R ;
Daae, FL ;
Torsvik, V ;
Zeyer, J ;
Hahn, D .
SYSTEMATIC AND APPLIED MICROBIOLOGY, 1998, 21 (04) :579-587
[4]   Identification of the two essential groups in the family 3 β-glucosidase from Flavobacterium meningosepticum by labelling and tandem mass spectrometric analysis [J].
Chir, J ;
Withers, S ;
Wan, CF ;
Li, YK .
BIOCHEMICAL JOURNAL, 2002, 365 (03) :857-863
[5]   Exploration of soil bacterial communities for their potential as bioresource [J].
Dubey, Suresh Kumar ;
Tripathi, Anil Kumar ;
Upadhyay, Siddh Nath .
BIORESOURCE TECHNOLOGY, 2006, 97 (17) :2217-2224
[6]   BETA-GLUCOSIDASE SYSTEM OF NEUROSPORA CRASSA .I. BETA-GLUCOSIDASE + CELLULASE ACTIVITIES OF MUTANT + WILD-TYPE STRAINS [J].
EBERHART, B ;
CROSS, DF ;
CHASE, LR .
JOURNAL OF BACTERIOLOGY, 1964, 87 (04) :761-&
[7]   Cloning and identification of novel cellulase genes from uncultured microorganisms in rabbit cecum and characterization of the expressed cellulases [J].
Feng, Yi ;
Duan, Cheng-Jie ;
Pang, Hao ;
Mo, Xin-Chun ;
Wu, Chun-Feng ;
Yu, Yuan ;
Hu, Ya-Lin ;
Wei, Jie ;
Tang, Ji-Liang ;
Feng, Jia-Xun .
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 2007, 75 (02) :319-328
[8]   Novel hydrolase diversity retrieved from a metagenome library of bovine rumen microflora [J].
Ferrer, M ;
Golyshina, OV ;
Chernikova, TN ;
Khachane, AN ;
Reyes-Duarte, D ;
Dos Santos, VAPM ;
Strompl, C ;
Elborough, K ;
Jarvis, G ;
Neef, A ;
Yakimov, MM ;
Timmis, KN ;
Golyshin, PN .
ENVIRONMENTAL MICROBIOLOGY, 2005, 7 (12) :1996-2010
[9]   Metagenomic and small-subunit rRNA analyses reveal the genetic diversity of bacteria, archaea, fungi, and viruses in soil [J].
Fierer, Noah ;
Breitbart, Mya ;
Nulton, James ;
Salamon, Peter ;
Lozupone, Catherine ;
Jones, Ryan ;
Robeson, Michael ;
Edwards, Robert A. ;
Felts, Ben ;
Rayhawk, Steve ;
Knight, Rob ;
Rohwer, Forest ;
Jackson, Robert B. .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2007, 73 (21) :7059-7066
[10]   Metagenomics: Application of genomics to uncultured microorganisms [J].
Handelsman, J .
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS, 2004, 68 (04) :669-+