Mapping malaria risk in West Africa using a Bayesian nonparametric non-stationary model

被引:50
作者
Gosoniu, L. [1 ]
Vounatsou, P. [1 ]
Sogoba, N. [2 ]
Maire, N. [1 ]
Smith, T. [1 ]
机构
[1] Swiss Trop Inst, Dept Epidemiol & Publ Hlth, CH-4051 Basel, Switzerland
[2] Univ Mali, Malaria Res & Training Ctr, Bamako, Mali
关键词
TRANSMISSION;
D O I
10.1016/j.csda.2009.02.022
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
Malaria transmission is highly influenced by environmental and climatic conditions but their effects are often not linear. The climate-malaria relation is unlikely to be the same over large areas covered by different agro-ecological zones. Similarly, spatial correlation in malaria transmission arisen mainly due to spatially structured covariates (environmental and human made factors), could vary across the agro-ecological zones, introducing non-stationarity. Malaria prevalence data from West Africa extracted from the "Mapping Malaria Risk in Africa" database were analyzed to produce regional parasitaemia risk maps. A non-stationary geostatistical model was developed assuming that the underlying spatial process is a mixture of separate stationary processes within each zone. Non-linearity in the environmental effects was modeled by separate P-splines in each agro-ecological zone. The model allows smoothing at the borders between the zones. The P-splines approach has better predictive ability than categorizing the covariates as an alternative of modeling non-linearity. Model fit and prediction was handled within a Bayesian framework, using Markov chain Monte Carlo (MCMC) simulations. (C) 2009 Elsevier B.V. All rights reserved.
引用
收藏
页码:3358 / 3371
页数:14
相关论文
共 33 条
[1]  
Agbu P.A., 1994, The NOAA_NASA Pathfinder AVHRR Land Data Set User's Manual
[2]   Spatial modeling of house prices using normalized distance-weighted sums of stationary processes [J].
Banerjee, S ;
Gelfand, AE ;
Knight, JR ;
Sirmans, CF .
JOURNAL OF BUSINESS & ECONOMIC STATISTICS, 2004, 22 (02) :206-213
[3]  
Banerjee S., 2003, Hierarchical modeling and analysis for spatial data
[4]   ROBUST LOCALLY WEIGHTED REGRESSION AND SMOOTHING SCATTERPLOTS [J].
CLEVELAND, WS .
JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, 1979, 74 (368) :829-836
[5]   A climate-based distribution model of malaria transmission in sub-Saharan Africa [J].
Craig, MH ;
Snow, RW ;
le Sueur, D .
PARASITOLOGY TODAY, 1999, 15 (03) :105-111
[6]  
Crainiceanu CM, 2005, J STAT SOFTW, V14
[7]  
de Boor C., 1978, PRACTICAL GUIDE SPLI
[8]  
Dehnad K., 2012, Density estimation for statistics and data analysis, V29, P495, DOI [10.1201/9781315140919, 10.1080/00401706.1987.10488295]
[9]   Model-based geostatistics [J].
Diggle, PJ ;
Tawn, JA ;
Moyeed, RA .
JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES C-APPLIED STATISTICS, 1998, 47 :299-326
[10]  
Droogers P., 2001, 20 INT WAT MAN I