Comprehensive Energy Analysis for Various Types of π-Interaction

被引:262
作者
Singh, N. Jiten [1 ]
Min, Seung Kyu [1 ]
Kim, Dong Young [1 ]
Kim, Kwang S. [1 ]
机构
[1] Pohang Univ Sci & Technol, Dept Chem, Ctr Superfunct Mat, Pohang 790784, South Korea
关键词
EDGE-TO-FACE; DENSITY-FUNCTIONAL THEORY; DER-WAALS COMPLEXES; AROMATIC-AROMATIC INTERACTIONS; AB-INITIO CALCULATIONS; CATION-PI; BENZENE DIMER; ANION-PI; STACKING ENERGIES; BINDING-ENERGIES;
D O I
10.1021/ct800471b
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
We have investigated various types of pi-interactions, where one of the interacting pi-systems is represented by an aromatic benzene molecule. The system includes Rg-pi, CH-pi, pi-pi(D), pi-pi(T), H-pi(T), pi(+)-pi(D), pi(+)-pi(T), H+-pi(T), pi(+2)-pi(D), M+-pi, M+2-pi complexes, where Rg denotes a rare gas or noble atom, M denotes a metal, and D/T indicates displaced-stacked/T-shaped structure. The microsolvation effect is also considered. We note that the interaction between a cationic pi system and a neutral pi system (pi(cation)-pi interaction) is so far ambiguously considered as either pi-pi or cation-pi interaction. In terms of total binding energy, the pi(cation)-pi interaction is weaker than the cation-pi interaction, but much stronger than the pi-pi interaction. When the hydrophilic (N-H)(+) or (C-H)(+) group in a singly charged pi(+) system (as in protonated histidine, arginine, pyridine, or dimethyl imidazolium) interacts with pi-system, the complex favors a T-shaped form [pi+-pi(T) complex]. However, in the presence of polar solvating molecules or counteranions, these species interact with the (N-H)(+)/(C-H)(+) group, while the pi(+) system interacts with the neutral aromatic ring. Then, the displaced-stacked form [pi(+)-pi(D) complex] is favored or otherwise nearly isoenergetic to the pi(+)-pi(T) form. The pi(+)-pi systems are stabilized mainly by both dispersion and electrostatic energies. Ternary diagrams using either attractive energy components or both attractive and repulsive energy components show that the pi(+)-pi(D) complexes have more contribution from dispersion energy but less contribution from induction energy than the pi(+)-pi(T) complexes, while both complexes have similar percentage contributions from electrostatic and exchange energy components. In particular, the pi(+)-pi(D) complexes are found to be distinctly different from the pi-pi complexes and the non-pi organic or metallic cation-pi complexes.
引用
收藏
页码:515 / 529
页数:15
相关论文
共 132 条
[1]   Cooperative anion binding and electrochemical sensing by modular podands [J].
Abouderbala, LO ;
Belcher, WJ ;
Boutelle, MG ;
Cragg, PJ ;
Steed, JW ;
Turner, DR ;
Wallace, KJ .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (08) :5001-5006
[2]   Modeling styrene-styrene interactions [J].
Adamovic, I ;
Li, H ;
Lamm, MH ;
Gordon, MS .
JOURNAL OF PHYSICAL CHEMISTRY A, 2006, 110 (02) :519-525
[3]   Applications of the Cambridge Structural Database in organic chemistry and crystal chemistry [J].
Allen, FH ;
Motherwell, WDS .
ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE CRYSTAL ENGINEERING AND MATERIALS, 2002, 58 :407-422
[4]   The Cambridge Structural Database: a quarter of a million crystal structures and rising [J].
Allen, FH .
ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE, 2002, 58 (3 PART 1) :380-388
[5]  
[Anonymous], 2017, J MOL STRUCT, DOI DOI 10.1016/J.MOLSTRUC.2017.03.014
[6]   Detoxification of environmental mutagens and carcinogens: Structure, mechanism, and evolution of liver epoxide hydrolase [J].
Argiriadi, MA ;
Morisseau, C ;
Hammock, BD ;
Christianson, DW .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1999, 96 (19) :10637-10642
[7]  
Balzani V, 2000, ANGEW CHEM INT EDIT, V39, P3348, DOI 10.1002/1521-3773(20001002)39:19<3348::AID-ANIE3348>3.0.CO
[8]  
2-X
[9]   Stair motifs at protein-DNA interfaces:: Nonadditivity of H-bond, stacking, and cation-π interactions [J].
Biot, C ;
Wintjens, R ;
Rooman, M .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2004, 126 (20) :6220-6221
[10]   Free-energy calculations of protein-ligand cation-π and amino-π interactions:: From vacuum to proteinlike environments [J].
Biot, C ;
Buisine, E ;
Rooman, M .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2003, 125 (46) :13988-13994