CS-PSeq-Gen:: Simulating the evolution of protein sequence under constraints

被引：8

作者：

Tufféry, P ^{[1
]}

机构：

[1] Univ Paris 07, INSERM, U436, Equipe Bioinformat Genom & Mol, F-75251 Paris 05, France

来源：

BIOINFORMATICS | 2002年 / 18卷 / 07期

关键词：

D O I：

10.1093/bioinformatics/18.7.1015

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

CS-PSeq-Gen is a program derived from PSeq-Gen, designed to perform simulations of the evolution of protein sequences under the constraints of a reconstructed phylogeny. It also provides a basis for the investigation of the correlated evolution of sites.

引用

页码：1015 / 1016

页数：2

共 8 条

[1]

Grassly NC, 1997, COMPUT APPL BIOSCI, V13, P559

[2]

Hillis D.M., 1990, MOL SYSTEMATICS

[3] Structural constraints and emergence of sequence patterns in protein evolution [J].

Parisi, G ;

Echave, J .

MOLECULAR BIOLOGY AND EVOLUTION, 2001, 18 (05) :750-756

[4]

SCHONIGER M, 1995, COMPUT APPL BIOSCI, V11, P111

[5] Rose: generating sequence families [J].

Stoye, J ;

Evers, D ;

Meyer, F .

BIOINFORMATICS, 1998, 14 (02) :157-163

[6]

Swofford D.L., 1993, PAUP PHYLOGENY ANAL

[7] Exploring a phylogenetic approach for the detection of correlated substitutions in proteins [J].

Tufféry, P ;

Darlu, P .

MOLECULAR BIOLOGY AND EVOLUTION, 2000, 17 (11) :1753-1759

[8]

YANG Z, 1997, CABIOS, V13, P1555

← 1 →