Parameter based methods for compound selection from chemical databases

被引:103
作者
Hudson, BD [1 ]
Hyde, RM [1 ]
Rahr, E [1 ]
Wood, J [1 ]
机构
[1] UNIV ST ANDREWS,DEPT CHEM,ST ANDREWS KY16 9ST,FIFE,SCOTLAND
来源
QUANTITATIVE STRUCTURE-ACTIVITY RELATIONSHIPS | 1996年 / 15卷 / 04期
关键词
compound selection; high throughput screening; representative sets; chemical databases;
D O I
10.1002/qsar.19960150402
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
Two algorithms for the selection of subsets of compounds from chemical databases are presented and discussed. The first is designed to select representative subsets whilst the second is intended to select compounds which cover the available property space. Both make use of calculated physicochemical parameters in contrast to more common methods based on molecular fingerprints. This is an approach to molecular similarity which has proved successful in the past. The methods are illustrated with examples and discussed.
引用
收藏
页码:285 / 289
页数:5
相关论文
共 14 条
[1]   FUNCTIONAL-GROUP CONTRIBUTIONS TO DRUG RECEPTOR INTERACTIONS [J].
ANDREWS, PR ;
CRAIK, DJ ;
MARTIN, JL .
JOURNAL OF MEDICINAL CHEMISTRY, 1984, 27 (12) :1648-1657
[2]  
BAWDEN D, 1993, CHEM STRUCTURES, V2
[3]   PATTERN-RECOGNITION DISPLAY METHODS FOR THE ANALYSIS OF COMPUTED MOLECULAR-PROPERTIES [J].
HUDSON, B ;
LIVINGSTONE, DJ ;
RAHR, E .
JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN, 1989, 3 (01) :55-65
[4]  
JANSSEN PAJ, 1988, J PHARMACOL EXP THER, V244, P685
[5]   CLUSTERING USING A SIMILARITY MEASURE BASED ON SHARED NEAR NEIGHBORS [J].
JARVIS, RA ;
PATRICK, EA .
IEEE TRANSACTIONS ON COMPUTERS, 1973, C-22 (11) :1025-1034
[6]  
KIER LB, 1976, MED CHEM MONOGRAPHS, V14
[7]   CALCULATING LOG P(OCT) FROM STRUCTURES [J].
LEO, AJ .
CHEMICAL REVIEWS, 1993, 93 (04) :1281-1306
[8]   MEASURING DIVERSITY - EXPERIMENTAL-DESIGN OF COMBINATORIAL LIBRARIES FOR DRUG DISCOVERY [J].
MARTIN, EJ ;
BLANEY, JM ;
SIANI, MA ;
SPELLMEYER, DC ;
WONG, AK ;
MOOS, WH .
JOURNAL OF MEDICINAL CHEMISTRY, 1995, 38 (09) :1431-1436
[9]   STATISTICAL-METHOD FOR SURFACE PATTERN-MATCHING BETWEEN DISSIMILAR MOLECULES - ELECTROSTATIC POTENTIALS AND ACCESSIBLE SURFACES [J].
NAMASIVAYAM, S ;
DEAN, PM .
JOURNAL OF MOLECULAR GRAPHICS, 1986, 4 (01) :46-&
[10]   POTENT AND SELECTIVE-INHIBITION OF HIV-1 REPLICATION INVITRO BY A NOVEL SERIES OF TIBO DERIVATIVES [J].
PAUWELS, R ;
ANDRIES, K ;
DESMYTER, J ;
SCHOLS, D ;
KUKLA, MJ ;
BRESLIN, HJ ;
RAEYMAECKERS, A ;
VANGELDER, J ;
WOESTENBORGHS, R ;
HEYKANTS, J ;
SCHELLEKENS, K ;
JANSSEN, MAC ;
DECLERCQ, E ;
JANSSEN, PAJ .
NATURE, 1990, 343 (6257) :470-474