Machine learning model for predicting severity prognosis in patients infected with COVID-19: Study protocol from COVID-AI Brasil

被引:11
作者
Proenca Lobo Lopes, Flavia Paiva [1 ]
Kitamura, Felipe Campos [1 ]
Prado, Gustavo Faibischew [2 ]
de Aguiar Kuriki, Paulo Eduardo [1 ]
Taveira Garcia, Marcio Ricardo [1 ]
机构
[1] Diagnost Amer Dasa, Dept Radiol, Sao Paulo, SP, Brazil
[2] Hosp Alemao Oswaldo Cruz, Dept Innovat, Sao Paulo, SP, Brazil
关键词
D O I
10.1371/journal.pone.0245384
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
070301 [无机化学]; 070403 [天体物理学]; 070507 [自然资源与国土空间规划学]; 090105 [作物生产系统与生态工程];
摘要
The new coronavirus, which began to be called SARS-CoV-2, is a single-stranded RNA beta coronavirus, initially identified in Wuhan (Hubei province, China) and currently spreading across six continents causing a considerable harm to patients, with no specific tools until now to provide prognostic outcomes. Thus, the aim of this study is to evaluate possible findings on chest CT of patients with signs and symptoms of respiratory syndromes and positive epidemiological factors for COVID-19 infection and to correlate them with the course of the disease. In this sense, it is also expected to develop specific machine learning algorithm for this purpose, through pulmonary segmentation, which can predict possible prognostic factors, through more accurate results. Our alternative hypothesis is that the machine learning model based on clinical, radiological and epidemiological data will be able to predict the severity prognosis of patients infected with COVID-19. We will perform a multicenter retrospective longitudinal study to obtain a large number of cases in a short period of time, for better study validation. Our convenience sample (at least 20 cases for each outcome) will be collected in each center considering the inclusion and exclusion criteria. We will evaluate patients who enter the hospital with clinical signs and symptoms of acute respiratory syndrome, from March to May 2020. We will include individuals with signs and symptoms of acute respiratory syndrome, with positive epidemiological history for COVID-19, who have performed a chest computed tomography. We will assess chest CT of these patients and to correlate them with the course of the disease. Primary outcomes:1) Time to hospital discharge; 2) Length of stay in the ICU; 3) orotracheal intubation;4) Development of Acute Respiratory Discomfort Syndrome. Secondary outcomes:1) Sepsis; 2) Hypotension or cardiocirculatory dysfunction requiring the prescription of vasopressors or inotropes; 3) Coagulopathy; 4) Acute Myocardial Infarction; 5) Acute Renal Insufficiency; 6) Death. We will use the AUC and F1-score of these algorithms as the main metrics, and we hope to identify algorithms capable of generalizing their results for each specified primary and secondary outcome.
引用
收藏
页数:13
相关论文
共 19 条
[1]
Approaches Based on Artificial Intelligence and the Internet of Intelligent Things to Prevent the Spread of COVID-19: Scoping Review [J].
Adly, Aya Sedky ;
Adly, Afnan Sedky ;
Adly, Mahmoud Sedky .
JOURNAL OF MEDICAL INTERNET RESEARCH, 2020, 22 (08)
[2]
Deep Learning: A Primer for Radiologists [J].
Chartrand, Gabriel ;
Cheng, Phillip M. ;
Vorontsov, Eugene ;
Drozdzal, Michal ;
Turcotte, Simon ;
Pal, Christopher J. ;
Kadoury, Samuel ;
Tang, An .
RADIOGRAPHICS, 2017, 37 (07) :2113-2131
[3]
Current Applications and Future Impact of Machine Learning in Radiology [J].
Choy, Garry ;
Khalilzadeh, Omid ;
Michalski, Mark ;
Do, Synho ;
Samir, Anthony E. ;
Pianykh, Oleg S. ;
Geis, J. Raymond ;
Pandharipande, Pari V. ;
Brink, James A. ;
Dreyer, Keith J. .
RADIOLOGY, 2018, 288 (02) :318-328
[4]
Clinical features of patients infected with 2019 novel coronavirus in Wuhan, China [J].
Huang, Chaolin ;
Wang, Yeming ;
Li, Xingwang ;
Ren, Lili ;
Zhao, Jianping ;
Hu, Yi ;
Zhang, Li ;
Fan, Guohui ;
Xu, Jiuyang ;
Gu, Xiaoying ;
Cheng, Zhenshun ;
Yu, Ting ;
Xia, Jiaan ;
Wei, Yuan ;
Wu, Wenjuan ;
Xie, Xuelei ;
Yin, Wen ;
Li, Hui ;
Liu, Min ;
Xiao, Yan ;
Gao, Hong ;
Guo, Li ;
Xie, Jungang ;
Wang, Guangfa ;
Jiang, Rongmeng ;
Gao, Zhancheng ;
Jin, Qi ;
Wang, Jianwei ;
Cao, Bin .
LANCET, 2020, 395 (10223) :497-506
[5]
KHA-CARI guideline: KHA-CARI adaptation of the KDIGO Clinical Practice Guideline for Acute Kidney Injury [J].
Langham, Robyn G. ;
Bellomo, Rinaldo ;
D' Intini, Vincent ;
Endre, Zoltan ;
Hickey, Bernadette B. ;
McGuinness, Shay ;
Phoon, Richard K. S. ;
Salamon, Karen ;
Woods, Julie ;
Gallagher, Martin P. .
NEPHROLOGY, 2014, 19 (05) :261-265
[6]
Li LQ, 2020, J MED VIROL, V92, P577, DOI [10.1002/jmv.25757, 10.1016/j.jnlest.2020.100045]
[7]
CT quantification of pneumonia lesions in early days predicts progression to severe illness in a cohort of COVID-19 patients [J].
Liu, Fengjun ;
Zhang, Qi ;
Huang, Chao ;
Shi, Chunzi ;
Wang, Lin ;
Shi, Nannan ;
Fang, Cong ;
Shan, Fei ;
Mei, Xue ;
Shi, Jing ;
Song, Fengxiang ;
Yang, Zhongcheng ;
Ding, Zezhen ;
Su, Xiaoming ;
Lu, Hongzhou ;
Zhu, Tongyu ;
Zhang, Zhiyong ;
Shi, Lei ;
Shi, Yuxin .
THERANOSTICS, 2020, 10 (12) :5613-5622
[8]
Human-level control through deep reinforcement learning [J].
Mnih, Volodymyr ;
Kavukcuoglu, Koray ;
Silver, David ;
Rusu, Andrei A. ;
Veness, Joel ;
Bellemare, Marc G. ;
Graves, Alex ;
Riedmiller, Martin ;
Fidjeland, Andreas K. ;
Ostrovski, Georg ;
Petersen, Stig ;
Beattie, Charles ;
Sadik, Amir ;
Antonoglou, Ioannis ;
King, Helen ;
Kumaran, Dharshan ;
Wierstra, Daan ;
Legg, Shane ;
Hassabis, Demis .
NATURE, 2015, 518 (7540) :529-533
[9]
Evaluating Artificial Intelligence Applications in Clinical Settings [J].
Nsoesie, Elaine O. .
JAMA NETWORK OPEN, 2018, 1 (05)
[10]
Methodologic Guide for Evaluating Clinical Performance and Effect of Artificial Intelligence Technology for Medical Diagnosis and Prediction [J].
Park, Seong Ho ;
Han, Kyunghwa .
RADIOLOGY, 2018, 286 (03) :800-809