An ab initio study of DNA base pair hydrogen bonding: a comparison of plane-wave versus Gaussian-type function methods

被引:29
作者
Fellers, RS
Barsky, D
Gygi, F
Colvin, M
机构
[1] Lawrence Livermore Natl Lab, Computat Biol Grp, Livermore, CA 94550 USA
[2] Lawrence Livermore Natl Lab, Ctr Appl Sci Comp, Livermore, CA 94550 USA
关键词
D O I
10.1016/S0009-2614(99)00898-2
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
We have computed ab initio binding energies, optimum geometries, and electrostatic moments for several DNA base pairs by gradient-corrected density functional theory (DFT) using basis sets consisting of plane-wave or Gaussian-type functions. Our findings demonstrate that even with modest periodic cell dimensions and plane-wave cutoff energies, the plane-wave method yields equivalent results to Gaussian basis DFT using very large basis sets and counterpoise corrections. (C) 1999 Elsevier Science B.V. All rights reserved.
引用
收藏
页码:548 / 555
页数:8
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