Symmetry embedding in the reconstruction of macromolecular assemblies via the discrete Radon transform

被引:5
作者
Lanzavecchia, S
Cantele, F
Radermacher, M
Bellon, PL
机构
[1] Univ Milan, Dipartimento Chim Strutturale, I-20133 Milan, Italy
[2] Max Planck Inst Biophys, Abt Strukt Biol, D-60528 Frankfurt, Germany
关键词
symmetry (of protein assemblies); point groups (of protein assemblies); radon transform; three-dimensional reconstruction; virus reconstruction;
D O I
10.1016/S1047-8477(02)00004-7
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
In this paper we discuss the embedding of symmetry information in an algorithm for three-dimensional reconstruction, which is based on the discrete Radon transform. The original algorithm was designed for randomly oriented and in principal asymmetric particles. The expanded version presented here covers all symmetry point groups which can be exhibited by macromolecular protein assemblies. The orientations of all symmetry equivalent projections, based on the orientation of an experimental projection, are obtained using global group operators. Further, an improved interpolation scheme for the recovery of the three-dimensional discrete Radon transform has been designed for greater computational efficiency. The algorithm has been tested on phantom structures as well as on real data, a virus structure possessing icosahedral symmetry. (C) 2002 Elsevier Science (USA). All rights reserved.
引用
收藏
页码:259 / 272
页数:14
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