High resolution comparative genomic hybridization detects 7-8 megabasepair deletion in PCR amplified DNA

被引:3
作者
Larsen, J
Ottesen, AM
Kirchhoff, M
Lundsteen, C
Larsen, JK
机构
[1] Rigshosp, Finsen Ctr, Finsen Lab, DK-2100 Copenhagen, Denmark
[2] Rigshosp, Juliane Marie Ctr, Dept Growth & Reprod, DK-2100 Copenhagen, Denmark
[3] Rigshosp, Juliane Marie Ctr, Dept Clin Genet, DK-2100 Copenhagen, Denmark
来源
ANALYTICAL CELLULAR PATHOLOGY | 2001年 / 23卷 / 02期
关键词
high resolution comparative genomic hybridization; DOP-PCR; B-cell leukemia;
D O I
10.1155/2001/301570
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
We investigated if any change in spatial resolution of comparative genomic hybridization analysis could be detected when using DNA amplified by degenerate oligonucleotide primed PCR (DOP-PCR) as opposed to the use of unamplified DNA. Five DNA samples from B-cell leukemias with small 11q deletions were amplified by DOP-PCR and analysed by means of high resolution comparative genomic hybridization (HR-CGH) for the evaluation of aberration size detection limit. By means of HR-CGH, we found the detection limit of DOP-PCR CGH for deletions to be between 3 Mbp and 7-8 Mbp.
引用
收藏
页码:61 / 64
页数:4
相关论文
共 14 条
[1]  
Bentz M, 1998, GENE CHROMOSOME CANC, V21, P172, DOI 10.1002/(SICI)1098-2264(199802)21:2<172::AID-GCC14>3.3.CO
[2]  
2-T
[3]   COMPARATIVE GENOMIC HYBRIDIZATION FOR MOLECULAR CYTOGENETIC ANALYSIS OF SOLID TUMORS [J].
KALLIONIEMI, A ;
KALLIONIEMI, OP ;
SUDAR, D ;
RUTOVITZ, D ;
GRAY, JW ;
WALDMAN, F ;
PINKEL, D .
SCIENCE, 1992, 258 (5083) :818-821
[4]  
Kirchhoff M, 1999, GENE CHROMOSOME CANC, V25, P410, DOI 10.1002/(SICI)1098-2264(199908)25:4<410::AID-GCC17>3.0.CO
[5]  
2-J
[6]  
Kirchhoff M, 1998, CYTOMETRY, V31, P163, DOI 10.1002/(SICI)1097-0320(19980301)31:3<163::AID-CYTO3>3.3.CO
[7]  
2-1
[8]   Improved sensitivity in comparative genomic hybridization analysis of DNA heteroploid cell mixtures after pre-enrichment of subpopulations by fluorescence activated cell sorting [J].
Larsen, J ;
Kirchhoff, M ;
Rose, H ;
Gerdes, T ;
Maahr, J ;
Lundsteen, C ;
Larsen, JK .
ANALYTICAL CELLULAR PATHOLOGY, 1999, 19 (3-4) :119-124
[9]  
Larsen J, 2001, CYTOMETRY, V44, P317, DOI 10.1002/1097-0320(20010801)44:4<317::AID-CYTO1123>3.0.CO
[10]  
2-5