G-matrix Fourier transform NMR spectroscopy for complete protein resonance assignment

被引:106
作者
Atreya, HS
Szyperski, T [1 ]
机构
[1] SUNY Buffalo, NE Struct Genom Consortium, Dept Chem, Buffalo, NY 14260 USA
[2] SUNY Buffalo, NE Struct Genom Consortium, Dept Biol Struct, Buffalo, NY 14260 USA
关键词
D O I
10.1073/pnas.0403529101
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 [理学]; 0710 [生物学]; 09 [农学];
摘要
A G-matrix Fourier transform (GFT) NMR spectroscopy-based strategy for resonance assignment of proteins is described. Each of the GIFT NMR experiments presented here rapidly affords four-, five-, or six-dimensional spectral information in combination with precise measurements of chemical shifts. The resulting high information content enables one to obtain nearly complete assignments by using only four NMR experiments. For the backbone amide proton detected "out-and-back" experiments, data collection was further accelerated up to approximate to2.5-fold by use of longitudinal H-1 relaxation optimization. The GFT NMR experiments were acquired for three proteins with molecular masses ranging from 8.6 to 17 kDa, demonstrating that the proposed strategy is of key interest for automated resonance assignment in structural genomics.
引用
收藏
页码:9642 / 9647
页数:6
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