The NMR solution structure of the ion channel peptaibol chrysospermin C bound to dodecylphosphocholine micelles

被引:22
作者
Anders, R
Ohlenschläger, O
Soskic, V
Wenschuh, H
Heise, B
Brown, LR
机构
[1] Inst Mol Biotechnol, Abt Mol Biophys NMR Spektroskopie, D-07708 Jena, Germany
[2] Jerini Bio Tools, Berlin, Germany
来源
EUROPEAN JOURNAL OF BIOCHEMISTRY | 2000年 / 267卷 / 06期
关键词
chrysospermin C; ion channel; micelle; NMR; peptaibol;
D O I
10.1046/j.1432-1327.2000.01177.x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Chrysospermin C is a 19-residue peptaibol capable of forming transmembrane ion channels in phospholipid bilayers. The conformation of chrysospermin C bound to dodecylphosphocholine micelles has been solved using heteronuclear NMR spectroscopy. Selective N-15-labeling and C-13-labeling of specific alpha-aminoisobutyric acid residues was used to obtain complete stereospecific assignments for all eight alpha-aminoisobutyric acid residues. Structures were calculated using 339 distance constraints and 40 angle constraints obtained from NMR data. The NMR structures superimpose with mean global rmsd values to the mean structure of 0.27 Angstrom (backbone heavy atoms) and 0.42 Angstrom (all heavy atoms). Chrysospermin C bound to decylphosphocholine micelles displays two well-defined helices at the N-terminus (residues Phe1-Aib9) and C-terminus (Aib13-Trp-ol19). A slight bend preceding Pro14, i.e. encompassing residues 10-12, results in an angle of approximate to 38 degrees between the mean axes of the two helical regions. The bend structure observed for chrysospermin C is compatible with the sequences of all 18 long peptaibols and may represent a common 'active' conformation. The structure of chrysospermin C shows clear hydrophobic and hydrophilic surfaces which would be appropriate for the formation of oligomeric ion channels.
引用
收藏
页码:1784 / 1794
页数:11
相关论文
共 64 条
[1]  
Anders R, 1998, J PEPT RES, V52, P34
[2]   THE PROGRAM XEASY FOR COMPUTER-SUPPORTED NMR SPECTRAL-ANALYSIS OF BIOLOGICAL MACROMOLECULES [J].
BARTELS, C ;
XIA, TH ;
BILLETER, M ;
GUNTERT, P ;
WUTHRICH, K .
JOURNAL OF BIOMOLECULAR NMR, 1995, 6 (01) :1-10
[3]   MLEV-17-BASED TWO-DIMENSIONAL HOMONUCLEAR MAGNETIZATION TRANSFER SPECTROSCOPY [J].
BAX, A ;
DAVIS, DG .
JOURNAL OF MAGNETIC RESONANCE, 1985, 65 (02) :355-360
[4]   HETERONUCLEAR ISOTROPIC MIXING IN LIQUIDS [J].
BEARDEN, DW ;
BROWN, LR .
CHEMICAL PHYSICS LETTERS, 1989, 163 (4-5) :432-436
[5]  
Benedetti E, 1998, BIOPOLYMERS, V46, P433, DOI 10.1002/(SICI)1097-0282(199812)46:7<433::AID-BIP1>3.0.CO
[6]  
2-F
[7]   PEPTAIBOL ANTIBIOTICS - A STUDY ON THE HELICAL STRUCTURE OF THE 2-9 SEQUENCE OF EMERIMICIN-III AND EMERIMICIN-IV [J].
BENEDETTI, E ;
BAVOSO, A ;
DIBLASIO, B ;
PAVONE, V ;
PEDONE, C ;
TONIOLO, C ;
BONORA, GM .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-PHYSICAL SCIENCES, 1982, 79 (24) :7951-7954
[8]   COMBINED USE OF PROTON-PROTON OVERHAUSER ENHANCEMENTS AND A DISTANCE GEOMETRY ALGORITHM FOR DETERMINATION OF POLYPEPTIDE CONFORMATIONS - APPLICATION TO MICELLE-BOUND GLUCAGON [J].
BRAUN, W ;
BOSCH, C ;
BROWN, LR ;
GO, N ;
WUTHRICH, K .
BIOCHIMICA ET BIOPHYSICA ACTA, 1981, 667 (02) :377-396
[9]   Alamethicin channels - modelling via restrained molecular dynamics simulations [J].
Breed, J ;
Biggin, PC ;
Kerr, ID ;
Smart, OS ;
Sansom, MSP .
BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES, 1997, 1325 (02) :235-249
[10]   ALAMETHICIN CHANNELS MODELED BY SIMULATED ANNEALING AND MOLECULAR-DYNAMICS [J].
BREED, J ;
SANSOM, MSP .
BIOCHEMICAL SOCIETY TRANSACTIONS, 1994, 22 (02) :S157-S157