Molecular profiling to identify molecular mechanism in esophageal cancer with familial clustering

被引:51
作者
Chattopadhyay, Indranil [1 ]
Phukan, Rupkumar [3 ]
Singh, Avninder [1 ]
Vasudevan, Madavan [4 ]
Purkayastha, Joydeep [2 ]
Hewitt, Stepen [5 ]
Kataki, Amal [2 ]
Mahanta, Jagadish [3 ]
Kapur, Sujala [1 ]
Saxena, Sunita [1 ]
机构
[1] Inst Pathol, New Delhi 110029, India
[2] Dr B Borooah Canc Inst, Gauhati 781016, Assam, India
[3] Reg Med Res Ctr, Dibrugarh 786001, Assam, India
[4] Genotyp Technol P Ltd, Bangalore 560001, Karnataka, India
[5] NCI, Pathol Lab, Bethesda, MD 20892 USA
关键词
expression profile; familial esophageal cancer; microarray; ENDOTHELIAL GROWTH-FACTOR; EXPRESSION; CELLS; TUMOR; ANGIOGENESIS; ARGINASE;
D O I
10.3892/or_00000333
中图分类号
R73 [肿瘤学];
学科分类号
100214 [肿瘤学];
摘要
To identify the genes and molecular functional pathways involved in esophageal cancer, we analyzed the gene expression profile of esophageal tumor tissue from patients having family history of esophageal cancer by cDNA microarray. Three hundred and fifty differentially expressed genes (26 up-regulated and 324 down-regulated) were identified. Genes involved in humoral immune response (PF4), extracellular matrix organization (COL4A4), metabolism of xenobiotics (EPHX1), TGF-beta signaling (SMAD1) and calcium signaling pathways (VDAC1) were down-regulated and genes involved in regulation of actin cytoskeleton (WASL), neuroactive ligand receptor interaction (GRM3), Toll-like receptor (CD14), B-cell receptor (IFITM1) and insulin signaling pathways (FOXO1A) were up-regulated. Validation of differential expression of subset of genes by QRT-PCR and tissue microarray in familial and non-familial cases showed no significant difference in expression of these genes in two groups suggesting familial clustering occurs as result of sharing of common environmental factors. Gene expression profiling of clinical specimens from well characterized populations that have familial clustering of cancer identified molecular mechanism associated with progression of esophageal cancer.
引用
收藏
页码:1135 / 1146
页数:12
相关论文
共 28 条
[1]
Hyaluronan-CD44 interaction with neural Wiskott-Aldrich syndrome protein (N-WASP) promotes actin polymerization and ErbB2 activation leading to β-catenin nuclear translocation, transcriptional up-regulation, and cell migration in ovarian tumor cells [J].
Bourguignon, Lilly Y. W. ;
Peyrollier, Karine ;
Gilad, Eli ;
Brightman, Amy .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2007, 282 (02) :1265-1280
[2]
Gene expression profile of esophageal cancer in North East India by cDNA microarray analysis [J].
Chattopadhyay, Indranil ;
Kapur, Sujala ;
Purkayastha, Joydeep ;
Phukan, Rupkumar ;
Kataki, Amal ;
Mahanta, Jagadish ;
Saxena, Sunita .
WORLD JOURNAL OF GASTROENTEROLOGY, 2007, 13 (09) :1438-1444
[3]
Chronic inflammation and oxidative stress in human carcinogenesis [J].
Federico, Alessandro ;
Morgillo, Floriana ;
Tuccillo, Concetta ;
Ciardiello, Fortunato ;
Loguercio, Carmela .
INTERNATIONAL JOURNAL OF CANCER, 2007, 121 (11) :2381-2386
[4]
Glucocorticoids inhibit apoptosis during fibrosarcoma development by transcriptionally activating Bcl-xL [J].
Gascoyne, DM ;
Kypta, RM ;
Vivanco, MDM .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2003, 278 (20) :18022-18029
[5]
The hallmarks of cancer [J].
Hanahan, D ;
Weinberg, RA .
CELL, 2000, 100 (01) :57-70
[6]
Familial risks of cancer as a guide to gene identification and mode of inheritance [J].
Hemminki, K ;
Li, XJ .
INTERNATIONAL JOURNAL OF CANCER, 2004, 110 (02) :291-294
[7]
TLR signaling by tumor and immune cells: a double-edged sword [J].
Huang, B. ;
Zhao, J. ;
Unkeless, J. C. ;
Feng, Z. H. ;
Xiong, H. .
ONCOGENE, 2008, 27 (02) :218-224
[8]
Inflammation and cancer: An ancient link with novel potentials [J].
Hussain, S. Perwez ;
Harris, Curtis C. .
INTERNATIONAL JOURNAL OF CANCER, 2007, 121 (11) :2373-2380
[9]
Loss of expression of type IV collagen α5 and α6 chains in colorectal cancer associated with the hypermethylation of their promoter region [J].
Ikeda, K ;
Iyama, K ;
Ishikawa, N ;
Egami, H ;
Nakao, M ;
Sado, Y ;
Ninomiya, Y ;
Baba, H .
AMERICAN JOURNAL OF PATHOLOGY, 2006, 168 (03) :856-865
[10]
Constitutive phosphorylation of the FOXO1A transcription factor as a prognostic variable in gastric cancer [J].
Kim, Ji Hun ;
Kim, Min Kyu ;
Lee, Hee Eun ;
Cho, Sung Jin ;
Cho, Yu Jin ;
Lee, Byung Lan ;
Lee, Hye Seung ;
Nam, Seon Young ;
Lee, Jae-Seon ;
Kim, Woo Ho .
MODERN PATHOLOGY, 2007, 20 (08) :835-842