In cell respiration, cytochrome-c oxidase utilizes electrons from catabolism to reduce O-2 to water. Energy is conserved as an electrochemical proton gradient across the mitochondrial membrane, which drives the synthesis of ATP. Electrical charge translocation during the reaction of the reduced enzyme with O, takes place in two phases of identical amplitude. The first phase (tau(1) = 0.2 ms) occurs after an initial lag, and appears to correspond to the transition from a peroxy to a ferryl intermediate in the oxygen chemistry. The second phase (tau(2) = 2.6 ms) matches the transition from the ferryl intermediate to the oxidised enzyme. These findings define the kinetic linkage between the chemistry and the major events of proton pumping by the enzyme.