Tilt angles of transmembrane model peptides in oriented and non-oriented lipid bilayers as determined by 2H solid-state NMR

被引:154
作者
Strandberg, E
Özdirekcan, S
Rijkers, DTS
van der Wel, PCA
Koeppe, RE
Liskamp, RMJ
Killian, JA [1 ]
机构
[1] Univ Utrecht, Inst Biomembranes, Ctr Biomembranes & Lipid Enzymol, Dept Membrane Biochem, Utrecht, Netherlands
[2] Univ Utrecht, Utrecht Inst Pharmaceut Sci, Dept Med Chem, Fac Pharm, Utrecht, Netherlands
[3] Univ Arkansas, Dept Chem & Biochem, Fayetteville, AR 72701 USA
基金
美国国家科学基金会;
关键词
D O I
10.1529/biophysj.103.035402
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
Solid-state NMR methods employing H-2 NMR and geometric analysis of labeled alanines (GALA) were used to study the structure and orientation of the transmembrane a-helical peptide acetyl-GWW(LA)(8)LWWA-amide (WALP23) in phosphatidylcholine (PC) bilayers of varying thickness. In all lipids the peptide was found to adopt a transmembrane alpha-helical conformation. A small tilt angle of 4.5degrees was observed in di-18:1-PC, which has a hydrophobic bilayer thickness that approximately matches the hydrophobic length of the peptide. This tilt angle increased slightly but systematically with increasing positive mismatch to 8.2degrees in di-C12:0-PC, the shortest lipid used. This small increase in tilt angle is insufficient to significantly change the effective hydrophobic length of the peptide and thereby to compensate for the increasing hydrophobic mismatch, suggesting that tilt of these peptides in a lipid bilayer is energetically unfavorable. The tilt and also the orientation around the peptide axis were found to be very similar to the values previously reported for a shorter WALP19 peptide (GWW(LA)(6)LWWA). As also observed in this previous study, the peptide rotates rapidly around the bilayer normal, but not around its helix axis. Here we show that these properties allow application of the GALA method not only to macroscopically aligned samples but also to randomly oriented samples, which has important practical advantages. A minimum of four labeled alanine residues in the hydrophobic transmembrane sequence was found to be required to obtain accurate tilt values using the GALA method.
引用
收藏
页码:3709 / 3721
页数:13
相关论文
共 42 条
[1]   Statistical analysis of predicted transmembrane α-helices [J].
Arkin, IT ;
Brunger, AT .
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEIN STRUCTURE AND MOLECULAR ENZYMOLOGY, 1998, 1429 (01) :113-128
[2]   Orientations of helical peptides in membrane bilayers by solid state NMR spectroscopy [J].
Bechinger, B ;
Gierasch, LM ;
Montal, M ;
Zasloff, M ;
Opella, SJ .
SOLID STATE NUCLEAR MAGNETIC RESONANCE, 1996, 7 (03) :185-191
[3]   Cumulative effects of amino acid substitutions and hydrophobic mismatch upon the transmembrane stability and conformation of hydrophobic α-helices [J].
Caputo, GA ;
London, E .
BIOCHEMISTRY, 2003, 42 (11) :3275-3285
[4]   THE DESCRIPTION OF MEMBRANE LIPID CONFORMATION, ORDER AND DYNAMICS BY H-2-NMR [J].
DAVIS, JH .
BIOCHIMICA ET BIOPHYSICA ACTA, 1983, 737 (01) :117-171
[5]   Protein-lipid interactions studied with designed transmembrane peptides: role of hydrophobic matching and interfacial anchoring (Review) [J].
de Planque, MRR ;
Killian, JA .
MOLECULAR MEMBRANE BIOLOGY, 2003, 20 (04) :271-284
[6]   Different membrane anchoring positions of tryptophan and lysine in synthetic transmembrane α-helical peptides [J].
de Planque, MRR ;
Kruijtzer, JAW ;
Liskamp, RMJ ;
Marsh, D ;
Greathouse, DV ;
Koeppe, RE ;
de Kruijff, B ;
Killian, JA .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1999, 274 (30) :20839-20846
[7]   Interfacial anchor properties of tryptophan residues in transmembrane peptides can dominate over hydrophobic matching effects in peptide-lipid interactions [J].
de Planque, MRR ;
Bonev, BB ;
Demmers, JAA ;
Greathouse, DV ;
Koeppe, RE ;
Separovic, F ;
Watts, A ;
Killian, JA .
BIOCHEMISTRY, 2003, 42 (18) :5341-5348
[8]   Influence of lipid/peptide hydrophobic mismatch on the thickness of diacylphosphatidylcholine bilayers.: A 2H NMR and ESR study using designed transmembrane α-helical peptides and gramicidin A [J].
de Planque, MRR ;
Greathouse, DV ;
Koeppe, RE ;
Schäfer, H ;
Marsh, D ;
Killian, JA .
BIOCHEMISTRY, 1998, 37 (26) :9333-9345
[9]   Sensitivity of single membrane-spanning α-helical peptides to hydrophobic mismatch with a lipid bilayer:: Effects on backbone structure, orientation, and extent of membrane incorporation [J].
de Planque, MRR ;
Goormaghtigh, E ;
Greathouse, DV ;
Koeppe, RE ;
Kruijtzer, JAW ;
Liskamp, RMJ ;
de Kruijff, B ;
Killian, JA .
BIOCHEMISTRY, 2001, 40 (16) :5000-5010
[10]   Electrospray ionization mass spectrometry as a tool to analyze hydrogen/deuterium exchange kinetics of transmembrane peptides in lipid bilayers [J].
Demmers, JAA ;
Haverkamp, J ;
Heck, AJR ;
Koeppe, RE ;
Killian, JA .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2000, 97 (07) :3189-3194