Hydration profiles of aromatic amino acids:: conformations and vibrations of L-phenylalanine-(H2O)n clusters

被引:55
作者
Ebata, Takayuki [1 ]
Hashimoto, Takayo
Ito, Takafumi
Inokuchi, Yoshiya
Altunsu, Fuat
Brutschy, Bernhard
Tarakeshwar, P.
机构
[1] Hiroshima Univ, Grad Sch Sci, Dept Chem, Higashihiroshima 7398526, Japan
[2] Univ Frankfurt, Inst Phys & Theoret Chem, D-60438 Frankfurt, Germany
[3] Korea Inst Adv Study, Sch Computat Sci, Seoul 130722, South Korea
关键词
D O I
10.1039/b609229b
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
IR-UV double resonance spectroscopy and ab initio calculations were employed to investigate the structures and vibrations of the aromatic amino acid, L-phenylalanine-(H2O)(n) clusters formed in a supersonic free jet. Our results indicate that up to three water molecules are preferentially bound to both the carbonyl oxygen and the carboxyl hydrogen of L-phenylalanine (L-Phe) in a bridged hydrogen-bonded conformation. As the number of water molecules is increased, the bridge becomes longer. Two isomers are found for L-Phe-(H2O)(1), and both of them form a cyclic hydrogen-bond between the carboxyl group and the water molecule. In L-Phe-(H2O)(2), only one isomer was identified, in which two water molecules form extended cyclic hydrogen bonds with the carboxyl group. In the calculated structure of L-Phe-(H2O)(3) the bridge of water molecules becomes larger and exhibits an extended hydrogen-bond to the pi-system. Finally, in isolated L-Phe, the D conformer was found to be the most stable conformer by the experiment and by the ab initio calculation.
引用
收藏
页码:4783 / 4791
页数:9
相关论文
共 29 条
[1]   DENSITY-FUNCTIONAL EXCHANGE-ENERGY APPROXIMATION WITH CORRECT ASYMPTOTIC-BEHAVIOR [J].
BECKE, AD .
PHYSICAL REVIEW A, 1988, 38 (06) :3098-3100
[2]  
BOYS F, 1970, MOL PHYS, V19, P553, DOI DOI 10.1080/00268977000101561
[3]   Spectral signatures and structural motifs in isolated and hydrated monosaccharides:: phenyl α- and β-L-fucopyranoside [J].
Çarçabal, P ;
Patsias, T ;
Hünig, I ;
Liu, B ;
Kaposta, C ;
Snoek, LC ;
Gamblin, DP ;
Davis, BG ;
Simons, JP .
PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2006, 8 (01) :129-136
[4]   Hydrogen bonding and cooperativity in isolated and hydrated sugars:: mannose, galactose, glucose, and lactose [J].
Çarçabal, P ;
Jockusch, RA ;
Hünig, I ;
Snoek, LC ;
Kroemer, RT ;
Davis, BG ;
Gamblin, DP ;
Compagnon, I ;
Oomens, J ;
Simons, JP .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2005, 127 (32) :11414-11425
[5]   The role of water bridges in directing the conformational preferences of 3-indole-propionic acid and tryptamine [J].
Carney, JR ;
Dian, BC ;
Florio, GM ;
Zwier, TS .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2001, 123 (23) :5596-5597
[6]   Conformational structures of 3-phenyl-1-propionic acid, its p-hydroxy derivative, and its hydrated clusters [J].
Dickinson, JA ;
Joireman, PW ;
Randall, RW ;
Robertson, EG ;
Simons, JP .
JOURNAL OF PHYSICAL CHEMISTRY A, 1997, 101 (04) :513-521
[7]  
DJAFARI S, 1997, J CHEM PHYS, V107, P1057
[8]   Vibrational spectroscopy of small-sized hydrogen-bonded clusters and their ions [J].
Ebata, T ;
Fujii, A ;
Mikami, N .
INTERNATIONAL REVIEWS IN PHYSICAL CHEMISTRY, 1998, 17 (03) :331-361
[9]   OH stretching vibrations of phenol-(H2O)(1) and phenol-(H2O)(3) in the S-1 state [J].
Ebata, T ;
Mizuochi, N ;
Watanabe, T ;
Mikami, N .
JOURNAL OF PHYSICAL CHEMISTRY, 1996, 100 (02) :546-550
[10]  
FRISCH F, 2004, GAUSSIAN 03 REVISION