共 21 条
Development of a method based on surface enhanced laser desorption and ionization time of flight mass spectrometry for rapid identification of Klebsiella pneumoniae
被引:4
作者:

Xiao, Daiwen
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机构:
Sichuan Acad Med Sci, Clin Lab Dept, Chengdu 610072, Peoples R China
Sichuan Prov Peoples Hosp, Chengdu 610072, Peoples R China Sichuan Acad Med Sci, Clin Lab Dept, Chengdu 610072, Peoples R China

Yang, Yongchang
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机构:
Sichuan Acad Med Sci, Clin Lab Dept, Chengdu 610072, Peoples R China
Sichuan Prov Peoples Hosp, Chengdu 610072, Peoples R China Sichuan Acad Med Sci, Clin Lab Dept, Chengdu 610072, Peoples R China

Liu, Hua
论文数: 0 引用数: 0
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机构:
Sichuan Acad Med Sci, Clin Lab Dept, Chengdu 610072, Peoples R China
Sichuan Prov Peoples Hosp, Chengdu 610072, Peoples R China Sichuan Acad Med Sci, Clin Lab Dept, Chengdu 610072, Peoples R China

Yu, Hua
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机构:
Sichuan Acad Med Sci, Clin Lab Dept, Chengdu 610072, Peoples R China
Sichuan Prov Peoples Hosp, Chengdu 610072, Peoples R China Sichuan Acad Med Sci, Clin Lab Dept, Chengdu 610072, Peoples R China

Yan, Yingjun
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Sichuan Acad Med Sci, Clin Lab Dept, Chengdu 610072, Peoples R China
Sichuan Prov Peoples Hosp, Chengdu 610072, Peoples R China Sichuan Acad Med Sci, Clin Lab Dept, Chengdu 610072, Peoples R China

Huang, Wenfang
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机构:
Sichuan Acad Med Sci, Clin Lab Dept, Chengdu 610072, Peoples R China
Sichuan Prov Peoples Hosp, Chengdu 610072, Peoples R China Sichuan Acad Med Sci, Clin Lab Dept, Chengdu 610072, Peoples R China

Jiang, Wei
论文数: 0 引用数: 0
h-index: 0
机构:
Sichuan Acad Med Sci, Clin Lab Dept, Chengdu 610072, Peoples R China
Sichuan Prov Peoples Hosp, Chengdu 610072, Peoples R China Sichuan Acad Med Sci, Clin Lab Dept, Chengdu 610072, Peoples R China

Liao, Weijin
论文数: 0 引用数: 0
h-index: 0
机构:
Sichuan Acad Med Sci, Clin Lab Dept, Chengdu 610072, Peoples R China
Sichuan Prov Peoples Hosp, Chengdu 610072, Peoples R China Sichuan Acad Med Sci, Clin Lab Dept, Chengdu 610072, Peoples R China

Hu, Qi
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h-index: 0
机构:
Chongqing Med Univ, Dept Lab Med, Chongqing 400016, Peoples R China Sichuan Acad Med Sci, Clin Lab Dept, Chengdu 610072, Peoples R China

Huang, Bo
论文数: 0 引用数: 0
h-index: 0
机构:
Chongqing Med Univ, Dept Lab Med, Chongqing 400016, Peoples R China Sichuan Acad Med Sci, Clin Lab Dept, Chengdu 610072, Peoples R China
机构:
[1] Sichuan Acad Med Sci, Clin Lab Dept, Chengdu 610072, Peoples R China
[2] Sichuan Prov Peoples Hosp, Chengdu 610072, Peoples R China
[3] Chongqing Med Univ, Dept Lab Med, Chongqing 400016, Peoples R China
关键词:
identification;
K;
pneumoniae;
SELDI-TOF MS;
ARTIFICIAL NEURAL-NETWORKS;
MALDI-TOF MS;
CLASSIFICATION;
BIOMARKERS;
BACTERIA;
STRAINS;
LAVAGE;
LEVEL;
GENE;
DNAJ;
D O I:
10.1007/s12275-009-0092-z
中图分类号:
Q93 [微生物学];
学科分类号:
071005 ;
100705 ;
摘要:
A method based on surface enhanced laser desorption and ionization time of flight mass spectrometry (SELDI-TOF MS) was developed for the rapid identification of Klebsiella pneumoniae by directly applying bacterial colonies without further protein extraction. A total of 40 K. pneumoniae and 114 other related microorganisms isolated clinically were analyzed by SELDI-TOF MS. An identification model for K. pneumoniae was established by artificial neural networks (ANNs) with classification accuracy of 100%. The model was blindly tested with 43 K. pneumoniae and 53 control bacteria again. The results showed that the model was successful with accuracy of 96.9%, sensitivity of 100% and specificity of 943%. This strategy is potential for rapid identification of K. pneumoniae.
引用
收藏
页码:646 / 650
页数:5
相关论文
共 21 条
[1]
Identification of plasma protein biomarkers associated with idiopathic pulmonary arterial hypertension
[J].
Abdul-Salam, VB
;
Paul, GA
;
Ali, JO
;
Gibbs, SR
;
Rahman, D
;
Taylor, GW
;
Wilkins, MR
;
Edwards, RJ
.
PROTEOMICS,
2006, 6 (07)
:2286-2294

Abdul-Salam, VB
论文数: 0 引用数: 0
h-index: 0
机构: Univ London Imperial Coll Sci Technol & Med, Sect Proteom, London W12 0NN, England

Paul, GA
论文数: 0 引用数: 0
h-index: 0
机构: Univ London Imperial Coll Sci Technol & Med, Sect Proteom, London W12 0NN, England

Ali, JO
论文数: 0 引用数: 0
h-index: 0
机构: Univ London Imperial Coll Sci Technol & Med, Sect Proteom, London W12 0NN, England

Gibbs, SR
论文数: 0 引用数: 0
h-index: 0
机构: Univ London Imperial Coll Sci Technol & Med, Sect Proteom, London W12 0NN, England

Rahman, D
论文数: 0 引用数: 0
h-index: 0
机构: Univ London Imperial Coll Sci Technol & Med, Sect Proteom, London W12 0NN, England

Taylor, GW
论文数: 0 引用数: 0
h-index: 0
机构: Univ London Imperial Coll Sci Technol & Med, Sect Proteom, London W12 0NN, England

Wilkins, MR
论文数: 0 引用数: 0
h-index: 0
机构: Univ London Imperial Coll Sci Technol & Med, Sect Proteom, London W12 0NN, England

Edwards, RJ
论文数: 0 引用数: 0
h-index: 0
机构: Univ London Imperial Coll Sci Technol & Med, Sect Proteom, London W12 0NN, England
[2]
Artificial neural networks for decision-making in urologic oncology
[J].
Anagnostou, T
;
Remzi, M
;
Lykourinas, M
;
Djavan, D
.
EUROPEAN UROLOGY,
2003, 43 (06)
:596-603

Anagnostou, T
论文数: 0 引用数: 0
h-index: 0
机构: Univ Vienna, Dept Urol, A-1090 Vienna, Austria

Remzi, M
论文数: 0 引用数: 0
h-index: 0
机构: Univ Vienna, Dept Urol, A-1090 Vienna, Austria

Lykourinas, M
论文数: 0 引用数: 0
h-index: 0
机构: Univ Vienna, Dept Urol, A-1090 Vienna, Austria

Djavan, D
论文数: 0 引用数: 0
h-index: 0
机构: Univ Vienna, Dept Urol, A-1090 Vienna, Austria
[3]
Recognition of patients with cardiovascular disease by artificial neural networks
[J].
Baldassarre, D
;
Grossi, E
;
Buscema, M
;
Intraligi, M
;
Amato, M
;
Tremoli, E
;
Pustina, L
;
Castelnuovo, S
;
Sanvito, S
;
Gerosa, L
;
Sirtori, CR
.
ANNALS OF MEDICINE,
2004, 36 (08)
:630-640

Baldassarre, D
论文数: 0 引用数: 0
h-index: 0
机构: Univ Milan, Dept Pharmacol Sci, E Grossi Paoletti Ctr, I-20133 Milan, Italy

Grossi, E
论文数: 0 引用数: 0
h-index: 0
机构: Univ Milan, Dept Pharmacol Sci, E Grossi Paoletti Ctr, I-20133 Milan, Italy

Buscema, M
论文数: 0 引用数: 0
h-index: 0
机构: Univ Milan, Dept Pharmacol Sci, E Grossi Paoletti Ctr, I-20133 Milan, Italy

Intraligi, M
论文数: 0 引用数: 0
h-index: 0
机构: Univ Milan, Dept Pharmacol Sci, E Grossi Paoletti Ctr, I-20133 Milan, Italy

Amato, M
论文数: 0 引用数: 0
h-index: 0
机构: Univ Milan, Dept Pharmacol Sci, E Grossi Paoletti Ctr, I-20133 Milan, Italy

论文数: 引用数:
h-index:
机构:

Pustina, L
论文数: 0 引用数: 0
h-index: 0
机构: Univ Milan, Dept Pharmacol Sci, E Grossi Paoletti Ctr, I-20133 Milan, Italy

Castelnuovo, S
论文数: 0 引用数: 0
h-index: 0
机构: Univ Milan, Dept Pharmacol Sci, E Grossi Paoletti Ctr, I-20133 Milan, Italy

Sanvito, S
论文数: 0 引用数: 0
h-index: 0
机构: Univ Milan, Dept Pharmacol Sci, E Grossi Paoletti Ctr, I-20133 Milan, Italy

Gerosa, L
论文数: 0 引用数: 0
h-index: 0
机构: Univ Milan, Dept Pharmacol Sci, E Grossi Paoletti Ctr, I-20133 Milan, Italy

Sirtori, CR
论文数: 0 引用数: 0
h-index: 0
机构: Univ Milan, Dept Pharmacol Sci, E Grossi Paoletti Ctr, I-20133 Milan, Italy
[4]
An integrated approach utilizing artificial neural networks and SELDI mass spectrometry for the classification of human tumours and rapid identification of potential biomarkers
[J].
Ball, G
;
Mian, S
;
Holding, F
;
Allibone, RO
;
Lowe, J
;
Ali, S
;
Li, G
;
McCardle, S
;
Ellis, IO
;
Creaser, C
;
Rees, RC
.
BIOINFORMATICS,
2002, 18 (03)
:395-404

Ball, G
论文数: 0 引用数: 0
h-index: 0
机构: Nottingham Trent Univ, Dept Life Sci, Nottingham NG11 8NS, England

Mian, S
论文数: 0 引用数: 0
h-index: 0
机构: Nottingham Trent Univ, Dept Life Sci, Nottingham NG11 8NS, England

Holding, F
论文数: 0 引用数: 0
h-index: 0
机构: Nottingham Trent Univ, Dept Life Sci, Nottingham NG11 8NS, England

Allibone, RO
论文数: 0 引用数: 0
h-index: 0
机构: Nottingham Trent Univ, Dept Life Sci, Nottingham NG11 8NS, England

Lowe, J
论文数: 0 引用数: 0
h-index: 0
机构: Nottingham Trent Univ, Dept Life Sci, Nottingham NG11 8NS, England

Ali, S
论文数: 0 引用数: 0
h-index: 0
机构: Nottingham Trent Univ, Dept Life Sci, Nottingham NG11 8NS, England

Li, G
论文数: 0 引用数: 0
h-index: 0
机构: Nottingham Trent Univ, Dept Life Sci, Nottingham NG11 8NS, England

McCardle, S
论文数: 0 引用数: 0
h-index: 0
机构: Nottingham Trent Univ, Dept Life Sci, Nottingham NG11 8NS, England

Ellis, IO
论文数: 0 引用数: 0
h-index: 0
机构: Nottingham Trent Univ, Dept Life Sci, Nottingham NG11 8NS, England

论文数: 引用数:
h-index:
机构:

Rees, RC
论文数: 0 引用数: 0
h-index: 0
机构: Nottingham Trent Univ, Dept Life Sci, Nottingham NG11 8NS, England
[5]
Rapid identification of staphylococci isolated in clinical microbiology laboratories by matrix-assisted laser desorption ionization - Time of flight mass spectrometry
[J].
Carbonnelle, Etienne
;
Beretti, Jean-Luc
;
Cottyn, Stephanie
;
Quesne, Gilles
;
Berche, Patrick
;
Nassif, Xavier
;
Ferroni, Agnes
.
JOURNAL OF CLINICAL MICROBIOLOGY,
2007, 45 (07)
:2156-2161

Carbonnelle, Etienne
论文数: 0 引用数: 0
h-index: 0
机构: Hop Necker Enfants Malad, Microbiol Lab, F-75015 Paris, France

Beretti, Jean-Luc
论文数: 0 引用数: 0
h-index: 0
机构: Hop Necker Enfants Malad, Microbiol Lab, F-75015 Paris, France

Cottyn, Stephanie
论文数: 0 引用数: 0
h-index: 0
机构: Hop Necker Enfants Malad, Microbiol Lab, F-75015 Paris, France

Quesne, Gilles
论文数: 0 引用数: 0
h-index: 0
机构: Hop Necker Enfants Malad, Microbiol Lab, F-75015 Paris, France

Berche, Patrick
论文数: 0 引用数: 0
h-index: 0
机构: Hop Necker Enfants Malad, Microbiol Lab, F-75015 Paris, France

Nassif, Xavier
论文数: 0 引用数: 0
h-index: 0
机构: Hop Necker Enfants Malad, Microbiol Lab, F-75015 Paris, France

Ferroni, Agnes
论文数: 0 引用数: 0
h-index: 0
机构: Hop Necker Enfants Malad, Microbiol Lab, F-75015 Paris, France
[6]
Proteomic analysis of inflammatory biomarkers in bronchoalveolar lavage
[J].
de Torre, Carlos
;
Ying, Sai-Xia
;
Munson, Peter J.
;
Meduri, G. Umberto
;
Suffredini, Anthony F.
.
PROTEOMICS,
2006, 6 (13)
:3949-3957

de Torre, Carlos
论文数: 0 引用数: 0
h-index: 0
机构: NIH, Crit Care Med Dept, Ctr Clin, Bethesda, MD 20892 USA

Ying, Sai-Xia
论文数: 0 引用数: 0
h-index: 0
机构: NIH, Crit Care Med Dept, Ctr Clin, Bethesda, MD 20892 USA

Munson, Peter J.
论文数: 0 引用数: 0
h-index: 0
机构: NIH, Crit Care Med Dept, Ctr Clin, Bethesda, MD 20892 USA

Meduri, G. Umberto
论文数: 0 引用数: 0
h-index: 0
机构: NIH, Crit Care Med Dept, Ctr Clin, Bethesda, MD 20892 USA

Suffredini, Anthony F.
论文数: 0 引用数: 0
h-index: 0
机构: NIH, Crit Care Med Dept, Ctr Clin, Bethesda, MD 20892 USA
[7]
Matrix-assisted laser desorption ionization-time of flight mass spectrometry for identification of nonfermenting gram-negative bacilli isolated from cystic fibrosis patients
[J].
Degand, Nicolas
;
Carbonnelle, Etienne
;
Dauphin, Brunhilde
;
Beretti, Jean-Luc
;
Le Bourgeois, Muriel
;
Sermet-Gaudelus, Isabelle
;
Segonds, Christine
;
Berche, Patrick
;
Nassif, Xavier
;
Ferroni, Agnes
.
JOURNAL OF CLINICAL MICROBIOLOGY,
2008, 46 (10)
:3361-3367

Degand, Nicolas
论文数: 0 引用数: 0
h-index: 0
机构:
Hop Necker Enfants Malad, Microbiol Lab, AP HP, F-75015 Paris, France
Univ Paris 05, Fac Med, Paris, France Hop Necker Enfants Malad, Microbiol Lab, AP HP, F-75015 Paris, France

Carbonnelle, Etienne
论文数: 0 引用数: 0
h-index: 0
机构:
Hop Necker Enfants Malad, Microbiol Lab, AP HP, F-75015 Paris, France
Univ Paris 05, Fac Med, Paris, France Hop Necker Enfants Malad, Microbiol Lab, AP HP, F-75015 Paris, France

Dauphin, Brunhilde
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Paris 05, Fac Med, Paris, France Hop Necker Enfants Malad, Microbiol Lab, AP HP, F-75015 Paris, France

Beretti, Jean-Luc
论文数: 0 引用数: 0
h-index: 0
机构:
Hop Necker Enfants Malad, Microbiol Lab, AP HP, F-75015 Paris, France Hop Necker Enfants Malad, Microbiol Lab, AP HP, F-75015 Paris, France

Le Bourgeois, Muriel
论文数: 0 引用数: 0
h-index: 0
机构:
Hop Necker Enfants Malad, Serv Pneumol Pediat, Paris, France Hop Necker Enfants Malad, Microbiol Lab, AP HP, F-75015 Paris, France

Sermet-Gaudelus, Isabelle
论文数: 0 引用数: 0
h-index: 0
机构:
Hop Necker Enfants Malad, Serv Pediat Gen, Paris, France Hop Necker Enfants Malad, Microbiol Lab, AP HP, F-75015 Paris, France

Segonds, Christine
论文数: 0 引用数: 0
h-index: 0
机构:
Hop Purpan, Observ Cepacia, Toulouse, France Hop Necker Enfants Malad, Microbiol Lab, AP HP, F-75015 Paris, France

Berche, Patrick
论文数: 0 引用数: 0
h-index: 0
机构:
Hop Necker Enfants Malad, Microbiol Lab, AP HP, F-75015 Paris, France
Univ Paris 05, Fac Med, Paris, France Hop Necker Enfants Malad, Microbiol Lab, AP HP, F-75015 Paris, France

Nassif, Xavier
论文数: 0 引用数: 0
h-index: 0
机构:
Hop Necker Enfants Malad, Microbiol Lab, AP HP, F-75015 Paris, France
Univ Paris 05, Fac Med, Paris, France Hop Necker Enfants Malad, Microbiol Lab, AP HP, F-75015 Paris, France

Ferroni, Agnes
论文数: 0 引用数: 0
h-index: 0
机构:
Hop Necker Enfants Malad, Microbiol Lab, AP HP, F-75015 Paris, France Hop Necker Enfants Malad, Microbiol Lab, AP HP, F-75015 Paris, France
[8]
Artificial neural networks for predictive modeling in prostate cancer
[J].
Gamito E.J.
;
Crawford E.D.
.
Current Oncology Reports,
2004, 6 (3)
:216-221

Gamito E.J.
论文数: 0 引用数: 0
h-index: 0
机构:
University of Colorado, Health Sciences Center, Denver, CO 80262 University of Colorado, Health Sciences Center, Denver, CO 80262

Crawford E.D.
论文数: 0 引用数: 0
h-index: 0
机构:
University of Colorado, Health Sciences Center, Denver, CO 80262 University of Colorado, Health Sciences Center, Denver, CO 80262
[9]
Recommended test panel for differentiation of Klebsiella species on the basis of a trilateral interlaboratory evaluation of 18 biochemical tests
[J].
Hansen, DS
;
Aucken, HM
;
Abiola, T
;
Podschun, R
.
JOURNAL OF CLINICAL MICROBIOLOGY,
2004, 42 (08)
:3665-3669

Hansen, DS
论文数: 0 引用数: 0
h-index: 0
机构: Statens Serum Inst, Int Escherichia & Klebsiella Reference Ctr, WHO, Copenhagen, Denmark

Aucken, HM
论文数: 0 引用数: 0
h-index: 0
机构: Statens Serum Inst, Int Escherichia & Klebsiella Reference Ctr, WHO, Copenhagen, Denmark

Abiola, T
论文数: 0 引用数: 0
h-index: 0
机构: Statens Serum Inst, Int Escherichia & Klebsiella Reference Ctr, WHO, Copenhagen, Denmark

Podschun, R
论文数: 0 引用数: 0
h-index: 0
机构: Statens Serum Inst, Int Escherichia & Klebsiella Reference Ctr, WHO, Copenhagen, Denmark
[10]
Discrimination of intact mycobacteria at the strain level: A combined MALDI-TOF MS and biostatistical analysis
[J].
Hettick, Justin M.
;
Kashon, Michael L.
;
Slaven, James E.
;
Ma, Yan
;
Simpson, Janet P.
;
Siegel, Paul D.
;
Mazurek, Gerald N.
;
Weissman, David N.
.
PROTEOMICS,
2006, 6 (24)
:6416-6425

Hettick, Justin M.
论文数: 0 引用数: 0
h-index: 0
机构: Ctr Dis Control & Prevent, HELD, ACIB, NIOSH, Morgantown, WV 26505 USA

Kashon, Michael L.
论文数: 0 引用数: 0
h-index: 0
机构: Ctr Dis Control & Prevent, HELD, ACIB, NIOSH, Morgantown, WV 26505 USA

Slaven, James E.
论文数: 0 引用数: 0
h-index: 0
机构: Ctr Dis Control & Prevent, HELD, ACIB, NIOSH, Morgantown, WV 26505 USA

Ma, Yan
论文数: 0 引用数: 0
h-index: 0
机构: Ctr Dis Control & Prevent, HELD, ACIB, NIOSH, Morgantown, WV 26505 USA

Simpson, Janet P.
论文数: 0 引用数: 0
h-index: 0
机构: Ctr Dis Control & Prevent, HELD, ACIB, NIOSH, Morgantown, WV 26505 USA

Siegel, Paul D.
论文数: 0 引用数: 0
h-index: 0
机构: Ctr Dis Control & Prevent, HELD, ACIB, NIOSH, Morgantown, WV 26505 USA

Mazurek, Gerald N.
论文数: 0 引用数: 0
h-index: 0
机构: Ctr Dis Control & Prevent, HELD, ACIB, NIOSH, Morgantown, WV 26505 USA

Weissman, David N.
论文数: 0 引用数: 0
h-index: 0
机构: Ctr Dis Control & Prevent, HELD, ACIB, NIOSH, Morgantown, WV 26505 USA