The comet assay as a tool for human biomonitoring studies: The ComNet Project

被引:171
作者
Collins, Andrew [1 ]
Koppen, Gudrun [2 ]
Valdiglesias, Vanessa [3 ]
Dusinska, Maria [4 ]
Kruszewski, Marcin [5 ]
Moller, Peter [6 ]
Rojas, Emilio [7 ]
Dhawan, Alok [8 ,9 ]
Benzie, Iris [10 ]
Coskun, Erdem [11 ]
Moretti, Massimo [12 ]
Speit, Guenter [13 ]
Bonassi, Stefano [3 ]
机构
[1] Univ Oslo, Dept Nutr, Oslo, Norway
[2] Flemish Inst Technol Res VITO Mol, Dept Environm Toxicol, Antwerp, Belgium
[3] Ist Ricovero & Cura Carattere Sci IRCCS San Raffa, Unit Clin & Mol Epidemiol, Rome, Italy
[4] Norwegian Inst Air Res NILU, Hlth Effects Lab, Environm Chem MILK, Kjeller, Norway
[5] Inst Nucl Chem & Technol, PL-03195 Warsaw, Poland
[6] Univ Copenhagen, Environm Hlth Sect, Dept Publ Hlth, Copenhagen, Denmark
[7] Univ Nacl Autonoma Mexico, Inst Invest Biomed, Dept Med Genom & Toxicol Ambiental, Mexico City 04510, DF, Mexico
[8] Indian Inst Toxicol Res, CSIR, Nanomat Toxicol Grp, Lucknow, Uttar Pradesh, India
[9] Ahmedabad Univ, Sch Sci & Technol, Inst Life Sci, Ahmadabad, Gujarat, India
[10] Hong Kong Polytech Univ, Dept Hlth Technol & Informat, Kowloon, Hong Kong, Peoples R China
[11] Gazi Univ, Fac Pharm, Dept Toxicol, Ankara, Turkey
[12] Univ Perugia, Dept Med Surg Specialties & Publ Hlth, I-06100 Perugia, Italy
[13] Univ Ulm, Inst Humangenet, D-89069 Ulm, Germany
关键词
Human biomonitoring; Comet assay; DNA damage; DNA repair; Pooled analysis; OXIDATIVE DNA-DAMAGE; PERIPHERAL-BLOOD LYMPHOCYTES; SYSTEMIC-LUPUS-ERYTHEMATOSUS; ORAL-MUCOSA CELLS; OCCUPATIONAL-EXPOSURE; AIR-POLLUTION; ANTIOXIDANT CAPACITY; EPITHELIAL-CELLS; GENETIC-DAMAGE; CANCER-RISK;
D O I
10.1016/j.mrrev.2013.10.001
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 [微生物学]; 090105 [作物生产系统与生态工程];
摘要
The comet assay is widely used in human biomonitoring to measure DNA damage as a marker of exposure to genotoxic agents or to investigate genoprotective effects. Studies often involve small numbers of subjects, and design may be sub-optimal in other respects. In addition, comet assay protocols in use in different laboratories vary significantly. In spite of these difficulties, it is appropriate to carry out a pooled analysis of all available comet assay biomonitoring data, in order to establish baseline parameters of DNA damage, and to investigate associations between comet assay measurements and factors such as sex, age, smoking status, nutrition, lifestyle, etc. With this as its major objective, the ComNet project has recruited almost 100 research groups willing to share datasets. Here we provide a background to this project, discussing the history of the comet assay and practical issues that can critically affect its performance. We survey its diverse applications in biomonitoring studies, including environmental and occupational exposure to genotoxic agents, genoprotection by dietary and other factors, DNA damage associated with various diseases, and intrinsic factors that affect DNA damage levels in humans. We examine in depth the quality of data from a random selection of studies, from an epidemiological and statistical point of view. (C) 2013 Elsevier B.V. All rights reserved.
引用
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页码:27 / 39
页数:13
相关论文
共 172 条
[1]
Simplified method for the collection, storage, and comet assay analysis of DNA damage in whole blood [J].
Al-Salmani, Kamla ;
Abbas, Hussein H. K. ;
Schulpen, Sjors ;
Karbaschi, Mahsa ;
Abdalla, Intisar ;
Bowman, Karen J. ;
So, Kwok K. ;
Evans, Mark D. ;
Jones, George D. D. ;
Godschalk, Roger W. ;
Cooke, Marcus S. .
FREE RADICAL BIOLOGY AND MEDICINE, 2011, 51 (03) :719-725
[2]
DNA damage and plasma antioxidant indices in Bangladeshi type 2 diabetic patients [J].
Arif, M. ;
Islam, M. R. ;
Waise, T. M. Z. ;
Hassan, F. ;
Mondal, S. I. ;
Kabir, Y. .
DIABETES & METABOLISM, 2010, 36 (01) :51-57
[3]
Usefulness of biomarkers in population studies: From exposure to susceptibility and to prediction of cancer [J].
Au, William W. .
INTERNATIONAL JOURNAL OF HYGIENE AND ENVIRONMENTAL HEALTH, 2007, 210 (3-4) :239-246
[4]
A comparative performance test of standard, medium- and high-throughput comet assays [J].
Azqueta, Amaya ;
Gutzkow, Kristine B. ;
Priestley, Catherine C. ;
Meier, Silja ;
Walker, Joanne S. ;
Brunborg, Gunnar ;
Collins, Andrew R. .
TOXICOLOGY IN VITRO, 2013, 27 (02) :768-773
[5]
Towards a more reliable comet assay: Optimising agarose concentration, unwinding time and electrophoresis conditions [J].
Azqueta, Amaya ;
Gutzkow, Kristine B. ;
Brunborg, Gunnar ;
Collins, Andrew R. .
MUTATION RESEARCH-GENETIC TOXICOLOGY AND ENVIRONMENTAL MUTAGENESIS, 2011, 724 (1-2) :41-45
[6]
The influence of scoring method on variability in results obtained with the comet assay [J].
Azqueta, Amaya ;
Meier, Silja ;
Priestley, Catherine ;
Gutzkow, Kristine Bjerve ;
Brunborg, Gunnar ;
Sallette, Jerome ;
Soussaline, Francoise ;
Collins, Andrew .
MUTAGENESIS, 2011, 26 (03) :393-399
[7]
Oxidative damage to biological macromolecules in Prague bus drivers and garagemen: Impact of air pollution and genetic polymorphisms [J].
Bagryantseva, Yana ;
Novotna, Bozena ;
Rossner, Pavel, Jr. ;
Chvatalova, Irena ;
Milcova, Alena ;
Svecova, Vlasta ;
Lnenickova, Zdena ;
Solansky, Ivo ;
Sram, Radim J. .
TOXICOLOGY LETTERS, 2010, 199 (01) :60-68
[8]
Balachandar V, 2011, ASIAN PAC J CANCER P, V12, P35
[9]
Evaluation of the genetic alterations in direct and indirect exposures of hexavalent chromium [Cr(VI)] in leather tanning industry workers North Arcot District, South India [J].
Balachandar, Vellingiri ;
Arun, Meyyazhagan ;
Devi, Subramaniam Mohana ;
Velmurugan, Palanivel ;
Manikantan, Pappusamy ;
Kumar, Alagamuthu Karthick ;
Sasikala, Keshavarao ;
Venkatesan, Chinnakulandai .
INTERNATIONAL ARCHIVES OF OCCUPATIONAL AND ENVIRONMENTAL HEALTH, 2010, 83 (07) :791-801
[10]
DNA damage and repair in type 2 diabetes mellitus [J].
Blasiak, J ;
Arabski, M ;
Krupa, R ;
Wozniak, K ;
Zadrozny, M ;
Kasznicki, J ;
Zurawska, M ;
Drzewoski, J .
MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS, 2004, 554 (1-2) :297-304