Attenuated T-2 relaxation by mutual cancellation of dipole-dipole coupling and chemical shift anisotropy indicates an avenue to NMR structures of very large biological macromolecules in solution

被引:2011
作者
Pervushin, K [1 ]
Riek, R [1 ]
Wider, G [1 ]
Wuthrich, K [1 ]
机构
[1] ETH HONGGERBERG,INST MOL BIOL & BIOPHYS,CH-8093 ZURICH,SWITZERLAND
关键词
D O I
10.1073/pnas.94.23.12366
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
East transverse relaxation of H-1, N-15, and C-13 by dipole-dipole coupling (DD) and chemical shift anisotropy (CSA) modulated by rotational molecular motions has a dominant impact on the size limit for biomacromolecular structures that can be studied by NMR spectroscopy in solution, Transverse relaxation-optimized spectroscopy (TROSY) is an approach for suppression of transverse relaxation in multidimensional NMR experiments, which is based on constructive use of interference between DD coupling and CSA. For example, a TROSY-type two-dimensional H-1, N-15-correlation experiment with a uniformly N-15-labeled protein in a DNA complex of molecular mass 17 kDa at a H-1 frequency of 750 MHz showed that N-15 relaxation during N-15 chemical shift evolution and H-1(N) relaxation during signal acquisition both are significantly reduced by mutual compensation of the DD and CSA interactions, The reduction of the linewidths when compared with a conventional two-dimensional H-1, N-15-correlation experiment was 60% and 40%, respectively, and the residual linewidths were 5 Hz for N-15 and 15 Hz for H-1(N) at 4 degrees C, Because the ratio of the DD and CSA relaxation rates is nearly independent of the molecular size, a similar percentagewise reduction of the overall transverse relaxation rates is expected for larger proteins, For a N-15-labeled protein of 150 kDa at 750 MHz and 20 degrees C one predicts residual linewidths of 10 Hz for N-15 and 45 Hz for H-1(N), and for the corresponding uniformly N-15, H-2-labeled protein the residual linewidths are predicted to be smaller than 5 Hz and 15 Hz, respectively, The TROSY principle should benefit a variety of multidimensional solution NMR experiments, especially with future use of yet somewhat higher polarizing magnetic fields than are presently available, and thus largely eliminate one of the key factors that limit work with larger molecules.
引用
收藏
页码:12366 / 12371
页数:6
相关论文
共 37 条
[1]  
ABRAGAM A, 1961, PRINCIPLES NUCLEAR M
[2]  
ARATA Y, 1994, METHOD ENZYMOL, V239, P440
[3]   NATURAL ABUNDANCE N-15 NMR BY ENHANCED HETERONUCLEAR SPECTROSCOPY [J].
BODENHAUSEN, G ;
RUBEN, DJ .
CHEMICAL PHYSICS LETTERS, 1980, 69 (01) :185-189
[4]  
Bystrov V. F., 1976, PROGR NMR SPECTROSCO, V10, P41
[5]  
Ernst RR, 1987, PRINCIPLES NUCL MAGN
[6]  
FARRAR TC, 1996, ENCY NMR, V6, P4101
[7]   BACKBONE DYNAMICS OF A FREE AND A PHOSPHOPEPTIDE-COMPLEXED SRC HOMOLOGY-2 DOMAIN STUDIED BY N-15 NMR RELAXATION [J].
FARROW, NA ;
MUHANDIRAM, R ;
SINGER, AU ;
PASCAL, SM ;
KAY, CM ;
GISH, G ;
SHOELSON, SE ;
PAWSON, T ;
FORMANKAY, JD ;
KAY, LE .
BIOCHEMISTRY, 1994, 33 (19) :5984-6003
[8]   INTERFERENCE EFFECTS IN THE RELAXATION OF A PAIR OF UNLIKE SPIN-1/2 NUCLEI [J].
GOLDMAN, M .
JOURNAL OF MAGNETIC RESONANCE, 1984, 60 (03) :437-452
[9]   PROTON-DETECTED HETERONUCLEAR EDITED AND CORRELATED NUCLEAR-MAGNETIC-RESONANCE AND NUCLEAR OVERHAUSER EFFECT IN SOLUTION [J].
GRIFFEY, RH ;
REDFIELD, AG .
QUARTERLY REVIEWS OF BIOPHYSICS, 1987, 19 (1-2) :51-82
[10]   MULTIPLE-QUANTUM LINE NARROWING FOR MEASUREMENT OF H-ALPHA-H-BETA J-COUPLINGS IN ISOTOPICALLY ENRICHED PROTEINS [J].
GRZESIEK, S ;
KUBONIWA, H ;
HINCK, AP ;
BAX, A .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1995, 117 (19) :5312-5315