Functionalizing Designer DNACrystals with a Triple-Helical Veneer

被引:58
作者
Rusling, David A. [1 ]
Chandrasekaran, Arun Richard [4 ]
Ohayon, Yoel P. [4 ]
Brown, Tom [2 ]
Fox, Keith R. [1 ]
Sha, Ruojie [4 ]
Mao, Chengde [3 ]
Seeman, Nadrian C. [4 ]
机构
[1] Univ Southampton, Ctr Biol Sci, Southampton SO17 1BJ, Hants, England
[2] Univ Oxford, Dept Chem, Oxford OX1 3QZ, England
[3] Purdue Univ, Dept Chem, W Lafayette, IN 47907 USA
[4] NYU, Dept Chem, New York, NY 10003 USA
基金
英国生物技术与生命科学研究理事会; 美国国家科学基金会;
关键词
DNA crystal; nanostructure; self-assembly; tensegrity; triple-helix; FORMING OLIGONUCLEOTIDES; DNA CRYSTAL; RECOGNITION; JUNCTIONS; MOLECULES;
D O I
10.1002/anie.201309914
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
DNA is a very useful molecule for the programmed self-assembly of 2D and 3D nanoscale objects.1 The design of these structures exploits Watson-Crick hybridization and strand exchange to stitch linear duplexes into finite assemblies.2-4 The dimensions of these complexes can be increased by over five orders of magnitude through self-assembly of cohesive single-stranded segments (sticky ends).5,6 Methods that exploit the sequence addressability of DNA nanostructures will enable the programmable positioning of components in 2D and 3D space, offering applications such as the organization of nanoelectronics,7 the direction of biological cascades,8 and the structure determination of periodically positioned molecules by X-ray diffraction.9 To this end we present a macroscopic 3D crystal based on the 3-fold rotationally symmetric tensegrity triangle3,6 that can be functionalized by a triplex-forming oligonucleotide on each of its helical edges.
引用
收藏
页码:3979 / 3982
页数:4
相关论文
共 17 条
[1]  
[Anonymous], 2007, ANGEW CHEM INT ED, V46, P7956
[2]   Dual recognition of double-stranded DNA by 2′-aminoethoxy-modified oligonucleotides:: The solution structure of an intramolecular triplex obtained by NMR spectroscopy [J].
Blommers, MJJ ;
Natt, F ;
Jahnke, W ;
Cuenoud, B .
BIOCHEMISTRY, 1998, 37 (51) :17714-17725
[3]  
Cohen J.D., 2007, ANGEW CHEM, V119, P8102
[4]   Targeting DNA with triplexes [J].
Fox, KR .
CURRENT MEDICINAL CHEMISTRY, 2000, 7 (01) :17-37
[5]   DNA DOUBLE-CROSSOVER MOLECULES [J].
FU, TJ ;
SEEMAN, NC .
BIOCHEMISTRY, 1993, 32 (13) :3211-3220
[6]   Tensegrity: Construction of rigid DNA triangles with flexible four-arm DNA junctions [J].
Liu, D ;
Wang, MS ;
Deng, ZX ;
Walulu, R ;
Mao, CD .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2004, 126 (08) :2324-2325
[7]   Importance of clustered 2′-O-(2-aminoethyl) residues for the gene targeting activity of triple helix-forming oligonucleotides [J].
Puri, N ;
Majumdar, A ;
Cuenoud, B ;
Miller, PS ;
Seidman, MM .
BIOCHEMISTRY, 2004, 43 (05) :1343-1351
[8]   THE DESIGN OF A BIOCHIP - A SELF-ASSEMBLING MOLECULAR-SCALE MEMORY DEVICE [J].
ROBINSON, BH ;
SEEMAN, NC .
PROTEIN ENGINEERING, 1987, 1 (04) :295-300
[9]   Folding DNA to create nanoscale shapes and patterns [J].
Rothemund, PWK .
NATURE, 2006, 440 (7082) :297-302
[10]   Four base recognition by triplex-forming oligonucleotides at physiological pH [J].
Rusling, DA ;
Powers, VEC ;
Ranasinghe, RT ;
Wang, Y ;
Osborne, SD ;
Brown, T ;
Fox, KR .
NUCLEIC ACIDS RESEARCH, 2005, 33 (09) :3025-3032