Ty1-copia-retrotransposon behavior in a polyploid cotton

被引:46
作者
Hanson, RE
Islam-Faridi, MN
Crane, CF
Zwick, MS
Czeschin, DG
Wendel, JF
McKnight, TD
Price, HJ
Stelly, DM [1 ]
机构
[1] Texas A&M Univ, Dept Soil & Crop Sci, College Stn, TX 77843 USA
[2] Iowa State Univ, Dept Bot, Ames, IA 50011 USA
[3] Texas A&M Univ, Dept Biol, College Stn, TX 77843 USA
关键词
evolution; genome; Gossypium; polyploidization; repetitive element; retrotransposon;
D O I
10.1023/A:1009239522541
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Retrotransposons constitute a ubiquitous and dynamic component of plant genomes. Intragenomic and intergenomic comparisons of related genomes offer potential insights into retrotransposon behavior and genomic effects. Here, we have used fluorescent in-situ hybridization to determine the chromosomal distributions of a Ty1-copia-like retrotransposon in the cotton AD-genome tetraploid Gossypium hirsutum and closely related putative A- and D-genome diploid ancestors. Retrotransposon clone A108 hybridized to all G. hirsutum chromosomes, approximately equal in intensity in the A- and D-subgenomes. Similar results were obtained by hybridization of A108 to the A-genome diploid G. arboreum, whereas no signal was detected on chromosomes of the D-genome diploid G. raimondii. The significance and potential causes of these observations are discussed.
引用
收藏
页码:73 / 76
页数:4
相关论文
共 25 条
[1]   The origin of American tetraploid Gossypium species [J].
Beasley, JO .
AMERICAN NATURALIST, 1940, 74 :285-286
[2]  
Endrizzi J. E., 1985, Advances in Genetics, V23, P271, DOI 10.1016/S0065-2660(08)60515-5
[3]   EXTREME HETEROGENEITY OF TY1-COPIA GROUP RETROTRANSPOSONS IN PLANTS [J].
FLAVELL, AJ ;
SMITH, DB ;
KUMAR, A .
MOLECULAR & GENERAL GENETICS, 1992, 231 (02) :233-242
[4]   TY1-COPIA GROUP RETROTRANSPOSONS ARE UBIQUITOUS AND HETEROGENEOUS IN HIGHER-PLANTS [J].
FLAVELL, AJ ;
DUNBAR, E ;
ANDERSON, R ;
PEARCE, SR ;
HARTLEY, R ;
KUMAR, A .
NUCLEIC ACIDS RESEARCH, 1992, 20 (14) :3639-3644
[5]  
Fryxell P.A., 1992, Rheedea, V2, P108
[6]   Distribution of 5S and 18S-28S rDNA loci in a tetraploid cotton (Gossypium hirsutum L) and its putative diploid ancestors [J].
Hanson, RE ;
IslamFaridi, MN ;
Percival, EA ;
Crane, CF ;
Ji, YF ;
McKnight, TD ;
Stelly, DM ;
Price, HJ .
CHROMOSOMA, 1996, 105 (01) :55-61
[7]   RAPID EVOLUTION OF RNA GENOMES [J].
HOLLAND, J ;
SPINDLER, K ;
HORODYSKI, F ;
GRABAU, E ;
NICHOL, S ;
VANDEPOL, S .
SCIENCE, 1982, 215 (4540) :1577-1585
[8]  
Jewell David C., 1994, P484
[9]   The genomic and physical organization of Ty1-copia-like sequences as a component of large genomes in Pinus elliottii var elliottii and other gymnosperms [J].
Kamm, A ;
Doudrick, RL ;
HeslopHarrison, JS ;
Schmidt, T .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1996, 93 (07) :2708-2713
[10]   Chromosomal and genomic organization of Ty1-copia-like retrotransposon sequences in the genus Avena [J].
Katsiotis, A ;
Schmidt, T ;
HeslopHarrison, JS .
GENOME, 1996, 39 (02) :410-417