Toward the complete prediction of the 1H and 13C NMR spectra of complex organic molecules by DFT methods:: Application to natural substances

被引:191
作者
Bagno, Alessandro [1 ]
Rastrelli, Federico
Saielli, Giacomo
机构
[1] Univ Padua, Dipartimento Sci Chim, Padua, Italy
[2] CNR, Ist Tecnol Membrane, I-35131 Padua, Italy
关键词
density functional calculations; natural products; NMR spectroscopy; structure elucidation;
D O I
10.1002/chem.200501583
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The NMR parameters (H-1 and C-13 chemical shifts and coupling constants) for a series of naturally occurring molecules have been calculated mostly with DFT methods, and their spectra compared with available experimental ones. The comparison includes strychnine as a test case, as well as some examples of recently isolated natural products (corianlactone, daphnipaxinin, boletunone B) featuring unusual and/or crowded structures and, in the case of boletunone B, being the subject of a recent revision. Whenever experimental spectra were obtained in polar solvents, the calculation of NMR parameters was also carried out with the Integral Equation-Formalism Polarizable Continuum Model (IEF-PCM) continuum method. The computed results generally show a good agreement with experiment, as judged not only by statistical parameters but also by visual comparison of line spectra. The origin of the remaining discrepancies is attributed to the incomplete modeling of conformational and specific solvent effects.
引用
收藏
页码:5514 / 5525
页数:12
相关论文
共 68 条
[1]   Isolation and structure determination of aplidinones A-C from the Mediterranean ascidian Aplidium conicum:: A successful regiochemistry assignment by quantum mechanical 13C NMR chemical shift calculations [J].
Aiello, A ;
Fattorusso, E ;
Luciano, P ;
Mangoni, A ;
Menna, M .
EUROPEAN JOURNAL OF ORGANIC CHEMISTRY, 2005, 2005 (23) :5024-5030
[2]   The Cambridge Structural Database: a quarter of a million crystal structures and rising [J].
Allen, FH .
ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE, 2002, 58 (3 PART 1) :380-388
[3]   Predicting 13C NMR spectra by DFT calculations [J].
Bagno, A ;
Rastrelli, F ;
Saielli, G .
JOURNAL OF PHYSICAL CHEMISTRY A, 2003, 107 (46) :9964-9973
[4]  
Bagno A, 2001, CHEM-EUR J, V7, P1652, DOI 10.1002/1521-3765(20010417)7:8<1652::AID-CHEM16520>3.3.CO
[5]  
2-M
[6]   Correlation of empirical δ(TMS) and absolute NMR chemical shifts predicted by ab initio computations [J].
Baldridge, KK ;
Siegel, JS .
JOURNAL OF PHYSICAL CHEMISTRY A, 1999, 103 (20) :4038-4042
[7]  
Barone G, 2002, CHEM-EUR J, V8, P3233, DOI 10.1002/1521-3765(20020715)8:14<3233::AID-CHEM3233>3.0.CO
[8]  
2-0
[9]  
Barone G, 2002, CHEM-EUR J, V8, P3240, DOI 10.1002/1521-3765(20020715)8:14<3240::AID-CHEM3240>3.0.CO
[10]  
2-G