The crystal structure of an unusual processivity factor, herpes simplex virus UL42, bound to the C terminus of its cognate polymerase

被引:137
作者
Zuccola, HJ [1 ]
Filman, DJ [1 ]
Coen, DM [1 ]
Hogle, JM [1 ]
机构
[1] Harvard Univ, Sch Med, Dept Biol Chem & Mol, Boston, MA 02115 USA
关键词
D O I
10.1016/S1097-2765(00)80422-0
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Herpes simplex virus DNA polymerase is a heterodimer composed of a catalytic subunit, Pol, and an unusual processivity subunit, UL42, which, unlike processivity factors such as PCNA, directly binds DNA. The crystal structure of a complex of the C-terminal 36 residues of Pot bound to residues 1-319 of UL42 reveals remarkable similarities between UL42 and PCNA despite contrasting biochemical properties and lack of sequence homology. Moreover, the Pol-UL42 interaction resembles the interaction between the cell cycle regulator p21 and PCNA. The structure and previous data suggest that the UL42 monomer interacts with DNA quite differently than does multimeric toroidal PCNA, The details of the structure lead to a model for the mechanism of UL42, provide the basis for drug design, and allow modeling of other proteins that lack sequence homology with UL42 or PCNA.
引用
收藏
页码:267 / 278
页数:12
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共 66 条
  • [1] Methods used in the structure determination of bovine mitochondrial F-1 ATPase
    Abrahams, JP
    Leslie, AGW
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1996, 52 : 30 - 42
  • [2] Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
    Altschul, SF
    Madden, TL
    Schaffer, AA
    Zhang, JH
    Zhang, Z
    Miller, W
    Lipman, DJ
    [J]. NUCLEIC ACIDS RESEARCH, 1997, 25 (17) : 3389 - 3402
  • [3] Conserved domains in DNA repair proteins and evolution of repair systems
    Aravind, L
    Walker, DR
    Koonin, EV
    [J]. NUCLEIC ACIDS RESEARCH, 1999, 27 (05) : 1223 - 1242
  • [4] THE CCP4 SUITE - PROGRAMS FOR PROTEIN CRYSTALLOGRAPHY
    BAILEY, S
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1994, 50 : 760 - 763
  • [5] CLONING, SEQUENCING, AND FUNCTIONAL-CHARACTERIZATION OF THE 2 SUBUNITS OF THE PSEUDORABIES VIRUS DNA POLYMERASE HOLOENZYME - EVIDENCE FOR SPECIFICITY OF INTERACTION
    BERTHOMME, H
    MONAHAN, SJ
    PARRIS, DS
    JACQUEMONT, B
    EPSTEIN, AL
    [J]. JOURNAL OF VIROLOGY, 1995, 69 (05) : 2811 - 2818
  • [6] Secondary structure and structure-activity relationships of peptides corresponding to the subunit interface of herpes simplex virus DNA polymerase
    Bridges, KG
    Hua, QX
    Brigham-Burke, MR
    Martin, JD
    Hensley, P
    Dahl, CE
    Digard, P
    Weiss, MA
    Coen, DM
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2000, 275 (01) : 472 - 478
  • [7] Crystallography & NMR system:: A new software suite for macromolecular structure determination
    Brunger, AT
    Adams, PD
    Clore, GM
    DeLano, WL
    Gros, P
    Grosse-Kunstleve, RW
    Jiang, JS
    Kuszewski, J
    Nilges, M
    Pannu, NS
    Read, RJ
    Rice, LM
    Simonson, T
    Warren, GL
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1998, 54 : 905 - 921
  • [8] Carrodeguas JA, 1999, MOL CELL BIOL, V19, P4039
  • [9] MUTATIONS THAT SPECIFICALLY IMPAIR THE DNA-BINDING ACTIVITY OF THE HERPES-SIMPLEX VIRUS PROTEIN UL42
    CHOW, CS
    COEN, DM
    [J]. JOURNAL OF VIROLOGY, 1995, 69 (11) : 6965 - 6971
  • [10] CORDINGLEY MG, 1990, J BIOL CHEM, V265, P9062