Sample classification based on Bayesian spectral decomposition of metabonomic NMR data sets

被引:25
作者
Stoyanova, R
Nicholson, JK
Lindon, JC
Brown, TR
机构
[1] Fox Chase Canc Ctr, Philadelphia, PA 19111 USA
[2] Univ London Imperial Coll Sci Technol & Med, Fac Med, Div Biomed Sci, London SW7 2AZ, England
[3] Columbia Univ, Hatch Ctr MR Res, New York, NY 10032 USA
关键词
D O I
10.1021/ac049849e
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
H-1 NMR spectra of biofluids provides a wealth of biochemical information on the metabolic status of an organism. Through the application of pattern recognition and classification algorithms, the data have been shown to provide information on disease diagnosis and the beneficial and adverse effects of potential therapeutics. Here, a novel approach is described for identifying subsets of spectral patterns in databases of NMR spectra, and it is shown that the intensities of these spectral patterns can be related to the onset and recovery from a toxic lesion in both a time-related and dose-related fashion. These patterns form a new type of combination biomarker for the biological effect under study. The approach is illustrated with a study of liver toxicity in rats using NMR spectra of urine following administration of a model hepatotoxin hydrazine.
引用
收藏
页码:3666 / 3674
页数:9
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