An update on the nomenclature for the cellulose synthase genes in Populus

被引：105

作者：

Kumar, Manoj ^{[2
]}

Thammannagowda, Shivegowda ^{[3
]}

Bulone, Vincent ^{[4
]}

Chiang, Vincent ^{[5
]}

Han, Kyung-Hwan ^{[6
]}

Joshi, Chandrashekhar P. ^{[3
]}

Mansfield, Shawn D. ^{[7
]}

Mellerowicz, Ewa ^{[2
]}

Sundberg, Bjorn ^{[2
]}

Teeri, Tuula ^{[4
]}

Ellis, Brian E. ^{[1
]}

机构：

[1] Univ British Columbia, Michael Smith Labs, Vancouver, BC V6T 1Z4, Canada

[2] Swedish Univ Agr Sci, Dept Forest Genet & Plant Physiol, Umea Plant Sci Ctr, S-90183 Umea, Sweden

[3] Michigan Technol Univ, Sch Forest Resources & Environm Sci, Houghton, MI 49931 USA

[4] Royal Inst Technol Biotechnol, Dept Wood Biotechnol, Stockholm, Sweden

[5] N Carolina State Univ, Forest Biotechnol Grp, Raleigh, NC 27695 USA

[6] Michigan State Univ, Dept Forestry, E Lansing, MI 48824 USA

[7] Univ British Columbia, Dept Wood Sci, Vancouver, BC V6T 1Z4, Canada

来源：

TRENDS IN PLANT SCIENCE | 2009年 / 14卷 / 05期

关键词：

BLACK COTTONWOOD; WOOD FORMATION; CELL-WALLS; BIOSYNTHESIS; TRICHOCARPA; COMPLEXES; SEQUENCE; POPLAR; SUPERFAMILY; ARABIDOPSIS;

D O I：

10.1016/j.tplants.2009.02.004

中图分类号：

Q94 [植物学];

学科分类号：

071001 ;

摘要：

Cellulose synthase (CesA) is a central catalyst in the generation of the plant cell wall biomass and is, therefore, the focus of intense research. Characterization of individual CesA genes from Populus species has led to the publication of several different naming conventions for CesA gene family members in this model tree. To help reduce the resulting confusion, we propose here a new phylogeny-based CesA nomenclature that aligns the Populus CesA gene family with the established Arabidopsis thaliana CesA family structure.

引用

页码：248 / 254

页数：7

共 26 条

[1]

[Anonymous], 2001, POPLAR CULTURE N AM

[2] The biosynthesis of cellulose [J].

Brown, RM .

JOURNAL OF MACROMOLECULAR SCIENCE-PURE AND APPLIED CHEMISTRY, 1996, A33 (10) :1345-1373

[3] Cellulose biosynthesis: Exciting times for a difficult field of study [J].

Delmer, DP .

ANNUAL REVIEW OF PLANT PHYSIOLOGY AND PLANT MOLECULAR BIOLOGY, 1999, 50 :245-276

[4] Organization of cellulose synthase complexes involved in primary cell wall synthesis in Arabidopsis thaliana [J].

Desprez, Thierry ;

Juraniec, Michal ;

Crowell, Elizabeth Faris ;

Jouy, Helene ;

Pochylova, Zaneta ;

Parcy, Francois ;

Hofte, Herman ;

Gonneau, Martine ;

Vernhettes, Samantha .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2007, 104 (39) :15572-15577

[5] The genome sequence of black cottonwood (Populus trichocarpa) reveals 18 conserved cellulose synthase (CesA) genes [J].

Djerbi, S ;

Lindskog, M ;

Arvestad, L ;

Sterky, F ;

Teeri, TT .

PLANTA, 2005, 221 (05) :739-746

[6] Poplar carbohydrate-active enzymes.: Gene identification and expression analyses [J].

Geisler-Lee, J ;

Geisler, M ;

Coutinho, PM ;

Segerman, B ;

Nishikubo, N ;

Takahashi, J ;

Aspeborg, H ;

Djerbi, S ;

Master, E ;

Andersson-Gunnerås, S ;

Sundberg, B ;

Karpinski, S ;

Teeri, TT ;

Kleczkowski, LA ;

Henrissat, B ;

Mellerowicz, EJ .

PLANT PHYSIOLOGY, 2006, 140 (03) :946-962

[7] PHYML Online - a web server for fast maximum likelihood-based phylogenetic inference [J].

Guindon, S ;

Lethiec, F ;

Duroux, P ;

Gascuel, O .

NUCLEIC ACIDS RESEARCH, 2005, 33 :W557-W559

[8] A transcriptional roadmap to wood formation [J].

Hertzberg, M ;

Aspeborg, H ;

Schrader, J ;

Andersson, A ;

Erlandsson, R ;

Blomqvist, K ;

Bhalerao, R ;

Uhlén, M ;

Teeri, TT ;

Lundeberg, J ;

Sundberg, B ;

Nilsson, P ;

Sandberg, G .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (25) :14732-14737

[9] Populus:: A model system for plant biology [J].

Jansson, Stefan ;

Douglas, Carl J. .

ANNUAL REVIEW OF PLANT BIOLOGY, 2007, 58 :435-458

[10] Genomics of cellulose biosynthesis in poplars [J].

Joshi, CP ;

Bhandari, S ;

Ranjan, P ;

Kalluri, UC ;

Liang, X ;

Fujino, T ;

Samuga, A .

NEW PHYTOLOGIST, 2004, 164 (01) :53-61

← 1 2 3 →