Nested clade analysis statistics

被引:43
作者
Posada, David [1 ]
Crandall, Keith A.
Templeton, Alan R.
机构
[1] Univ Vigo, Fac Biol, Dept Bioquim Genet & Inmunol, Vigo 36310, Spain
[2] Brigham Young Univ, Dept Microbiol & Mol Biol, Provo, UT 84602 USA
[3] Washington Univ, Dept Biol, St Louis, MO 63130 USA
来源
MOLECULAR ECOLOGY NOTES | 2006年 / 6卷 / 03期
关键词
GEODIS; NCA; nested clade analysis; phylogeography; population genetics;
D O I
10.1111/j.1471-8286.2006.01368.x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Nested clade analysis (NCA) is a flexible and powerful method to study the phylogeography of species and populations, implemented in the software GEODIS. Despite the popularity of this method, an explicit description of the exact equations used to compute the NCA statistics has never been published. Given the importance of the methodology and increased interest in exactly how it works, here we describe the exact equations implemented in the program GEODIS for the calculation of these statistics.
引用
收藏
页码:590 / 593
页数:4
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