Characterization and regulation of catabolic genes

被引:9
作者
Johri, AK
Dua, M
Singh, A
Sethunathan, N
Legge, RL
机构
[1] Univ Delhi, Dept Zool, Mol Biol Lab, Delhi 7, India
[2] Univ Waterloo, Dept Biol, Microbial Biotechnol Lab, Waterloo, ON N2L 3G1, Canada
[3] Indian Agr Res Inst, PUSA, Div Microbiol, New Delhi 67, India
[4] Univ Waterloo, Fac Engn, Dept Chem Engn, Waterloo, ON N2L 3G1, Canada
关键词
catabolic genes; degradation; xenobiotic; enzymes; plasmid;
D O I
10.1080/10408419991299248
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Although a wide range of microorganisms have been discovered that are able to degrade highly stable, toxic xenobiotics, still many pollutants persist in the environment. Recent advances in the field of r-DNA technology has provided solutions to these problems. One important factor limiting the bioremediation of sites contaminated with certain hazardous wastes is the slow rate of degradation. This slow rate limits the practicality of using bacteria in remediating contaminated sites. It is possible to extend the range of substrates that an organism can utilize. It is even possible to endow an organism with the ability to degrade a predetermined range of xenobiotics. Because biotechnological processes are based on natural activities of microorganisms and costitute variations in classic domestic waste treatment processes, they are publicly more accepted. This is an area where genetic engineering can make a marked improvement by manipulating catabolic genes of microorganisms. Advances in r-DNA technology have opend up new avenues to move toward the goal of genetically engineered microorganisms to function as "designer biocatalysts" in which certain desirable biodegradation pathways or enzymes from different organisms are brought together in a single host with the aim of performing specific detoxification. In the last 2 decades much progress has been made in this direction, and as a result catabolic genes have been cloned and characterized for organochlorines, polychlorinatedbiphenyls, chlrobenzoates, naphthalene etc. The aim of this review is to provide an insight in the recent advances made on characterization and expression of catabolic genes that encode the degradation /detoxification of these pesistent and toxic xenobiotic compounds.
引用
收藏
页码:245 / 273
页数:29
相关论文
共 168 条
[1]   Metabolism of naphthalene, 1-naphthol, indene, and indole by Rhodococcus sp strain NCIMB 12038 [J].
Allen, CCR ;
Boyd, DR ;
Larkin, MJ ;
Reid, KA ;
Sharma, ND ;
Wilson, K .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1997, 63 (01) :151-155
[2]   BIODEGRADATION OF ALPHA-HEXACHLOROCYCLOHEXANE AND BETA-HEXACHLOROCYCLOHEXANE IN A SOIL SLURRY UNDER DIFFERENT REDOX CONDITIONS [J].
BACHMANN, A ;
WALET, P ;
WIJNEN, P ;
DEBRUIN, W ;
HUNTJENS, JLM ;
ROELOFSEN, W ;
ZEHNDER, AJB .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1988, 54 (01) :143-149
[3]   ROLE AND REGULATION OF ORTHO-PATHWAY AND META PATHWAY OF CATECHOL METABOLISM IN PSEUDOMONADS METABOLIZING NAPHTHALENE AND SALICYLATE [J].
BARNSLEY, EA .
JOURNAL OF BACTERIOLOGY, 1976, 125 (02) :404-408
[4]   NAPHTHALENE METABOLISM BY PSEUDOMONADS - OXIDATION OF 1,2-DIHYDROXYNAPHTHALENE TO 2-HYDROXYCHROMENE-2-CARBOXYLIC ACID AND FORMATION OF 2'-HYDROXYBENZALPYRUVATE [J].
BARNSLEY, EA .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 1976, 72 (03) :1116-1121
[5]   INDUCTION OF ENZYMES OF NAPHTHALENE METABOLISM IN PSEUDOMONADS BY SALICYLATE AND 2-AMINOBENZOATE [J].
BARNSLEY, EA .
JOURNAL OF GENERAL MICROBIOLOGY, 1975, 88 (MAY) :193-196
[6]   Genetic and biochemical characterization of the broad spectrum chlorobenzene dioxygenase from Burkholderia sp. strain PS12 - Dechlorination of 1,2,4,5-tetrachlorobenzene [J].
Beil, S ;
Happe, B ;
Timmis, KN ;
Pieper, DH .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 1997, 247 (01) :190-199
[7]  
Bertoni G, 1998, APPL ENVIRON MICROB, V64, P3626
[8]   CHARACTERIZATION OF A NOVEL TOL-LIKE PLASMID FROM PSEUDOMONAS-PUTIDA INVOLVED IN 1,2,4-TRIMETHYLBENZENE DEGRADATION [J].
BESTETTI, G ;
GALLI, E .
JOURNAL OF BACTERIOLOGY, 1987, 169 (04) :1780-1783
[9]   IDENTIFICATION AND CHARACTERIZATION OF A NEW PLASMID CARRYING GENES FOR DEGRADATION OF 2,4-DICHLOROPHENOXYACETATE FROM PSEUDOMONAS-CEPACIA CSV90 [J].
BHAT, MA ;
TSUDA, M ;
HORIIKE, K ;
NOZAKI, M ;
VAIDYANATHAN, CS ;
NAKAZAWA, T .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1994, 60 (01) :307-312
[10]   VARIATION IN CHLOROBENZOATE CATABOLISM BY PSEUDOMONAS-PUTIDA P111 AS A CONSEQUENCE OF GENETIC ALTERATIONS [J].
BRENNER, V ;
HERNANDEZ, BS ;
FOCHT, DD .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1993, 59 (09) :2790-2794