Hepatitis C virus types 7, 8 and 9 should be classified as type 6 subtypes

被引:39
作者
Mizokami, M
Gojobori, T
Ohba, KI
Ikeo, K
Ge, XM
Ohno, T
Orito, E
Lau, JYN
机构
[1] UNIV FLORIDA,DEPT MED,DIV GASTROENTEROL HEPATOL & NUTR,SECT HEPATOBILIARY DIS,GAINESVILLE,FL 32610
[2] NAGOYA CITY UNIV,DEPT INTERNAL MED,NAGOYA,AICHI,JAPAN
[3] NATL INST GENET,DNA RES CTR,MISHIMA,SHIZUOKA 411,JAPAN
关键词
genotype; hepatitis C virus; type; molecular evolutionary analysis; subtype;
D O I
10.1016/S0168-8278(96)80149-8
中图分类号
R57 [消化系及腹部疾病];
学科分类号
摘要
Tokita et al, reported the identification of hepatitis C virus type 7, 8 and 9 in Southeast Asia, based on the unweighed pair-group method with the arithmetic mean, a method that may not be appropriate when the nucleotide suibstitution rate is not constant over time, To determine more accurately the relationship of these proposed types 7, 8, and 9 with other types, a more appropriate approach, the neighbor-joining method, was applied to re-evaluate the phylogenetic relationship. A total of 660 HCV sequences, including the reported sequences, were collected from DNA databases, For every region, the nucleotide substitution rate was estimated by the 6-parameter method, and phylogenetic trees were constructed using the neighbor-joining method, The results of this analysis indicate that the newly proposed HCV types 7, 8 and 9 should be classified as type 6 subtypes, HCV type 6 appears to be diversified.
引用
收藏
页码:622 / 624
页数:3
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