ConSeq: the identification of functionally and structurally important residues in protein sequences

被引:409
作者
Berezin, C
Glaser, F
Rosenberg, J
Paz, I
Pupko, T
Fariselli, P
Casadio, R
Ben-Tal, N [1 ]
机构
[1] Tel Aviv Univ, George S Wise Fac Life Sci, Dept Biochem, IL-69978 Tel Aviv, Israel
[2] Tel Aviv Univ, George S Wise Fac Life Sci, Dept Cell Res & Immunol, IL-69978 Tel Aviv, Israel
[3] Univ Bologna, Dept Biol, CIRB, Lab Biocomp, I-40126 Bologna, Italy
关键词
D O I
10.1093/bioinformatics/bth070
中图分类号
Q5 [生物化学];
学科分类号
071010 [生物化学与分子生物学]; 081704 [应用化学];
摘要
Motivation: ConSeq is a web server for the identification of biologically important residues in protein sequences. Functionally important residues that take part, e.g. in ligand binding and protein-protein interactions, are often evolutionarily conserved and are most likely to be solvent-accessible, whereas conserved residues within the protein core most probably have an important structural role in maintaining the protein's fold. Thus, estimated evolutionary rates, as well as relative solvent accessibility predictions, are assigned to each amino acid in the sequence; both are subsequently used to indicate residues that have potential structural or functional importance.
引用
收藏
页码:1322 / 1324
页数:3
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