A Genetic Variants Database for Arrhythmogenic Right Ventricular Dysplasia/Cardiomyopathy

被引:96
作者
van der Zwaag, Paul A. [1 ]
Jongbloed, Jan D. H. [1 ]
van den Berg, Maarten P. [2 ]
van der Smagt, Jasper J. [3 ]
Jongbloed, Roselie [4 ]
Bikker, Hennie [5 ]
Hofstra, Robert M. W. [1 ]
van Tintelen, J. Peter [1 ]
机构
[1] Univ Groningen, Univ Med Ctr Groningen, Dept Genet, NL-9700 RB Groningen, Netherlands
[2] Univ Groningen, Univ Med Ctr Groningen, Dept Cardiol, NL-9700 RB Groningen, Netherlands
[3] Univ Utrecht, Univ Med Ctr Utrecht, Dept Med Genet, Utrecht, Netherlands
[4] Univ Maastricht, Med Ctr, Dept Genet & Cell Biol, Maastricht, Netherlands
[5] Univ Amsterdam, Acad Med Ctr, Dept Clin Genet, NL-1105 AZ Amsterdam, Netherlands
关键词
heart disease; cardiomyopathy; database; DSC2; DSG2; DSP; JUP; PKP2; TGFB3; TMEM43; TP63; PLAKOGLOBIN NAXOS-DISEASE; WOOLLY HAIR; PALMOPLANTAR KERATODERMA; PLAKOPHILIN-2; MUTATIONS; DILATED CARDIOMYOPATHY; RECESSIVE MUTATION; MOLECULAR-GENETICS; SUDDEN-DEATH; EARLY-ONSET; LONG ARM;
D O I
10.1002/humu.21064
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Arrhythmogenic right ventricular dysplasia/cardiomyopathy (ARVD/C) is a hereditary cardiomyopathy characterized by fibrofatty replacement of cardiomyocytes, ventricular tachyarrhythmias and sudden death. ARVD/C is mainly caused by mutations in genes encoding desmosomal proteins. However, the pathogenicity of variants is not always clear. Therefore, we created an online database (www.arvcdatabase.info), providing information on variants in ARVD/C-associated genes. We searched the literature using ARVD/C and its underlying genes as search terms. From the selected papers and our unpublished data, we collected details on the type of mutation and information provided at the protein level. A "details page" contains clinical data and references. To aid the interpretation of missense mutations, we provide data from in silico prediction methods. In May 2009 the database contained 481 variants in eight genes. A total of 144 variants are considered pathogenic, 73 are unknown/unclassified, and 264 have no known pathogenicity. The database was converted into the Leiden Open Variation Database (LOVD) format, a gene-centered collection of DNA variations. The ARVD/C database will be useful for both researchers and clinicians. It can be searched to determine if variants have been published and whether they are considered pathogenic. External users are invited to add information to improve the quantity and quality of the data entered. Hum Mutat 30:1278-1283, 2009. (C) 2009 Wiley-Liss, Inc.
引用
收藏
页码:1278 / 1283
页数:6
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