Hemoglobin site-mutants reveal dynamical role of interhelical H-bonds in the allosteric pathway: Time-resolved UV resonance Raman evidence for intra-dimer coupling

被引:35
作者
Balakrishnan, G
Tsai, CH
Wu, Q
Case, MA
Pevsner, A
McLendon, GL
Ho, C
Spiro, TG [1 ]
机构
[1] Princeton Univ, Dept Chem, Princeton, NJ 08544 USA
[2] Carnegie Mellon Univ, Dept Biol Sci, Pittsburgh, PA 15213 USA
关键词
hemoglobin; site-mutants; allostery; protein dynamics; resonance Raman;
D O I
10.1016/j.jmb.2004.05.013
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The dynamical effect of eliminating specific tertiary H-bonds in the hemoglobin (Hb) tetramer has been investigated by site-directed mutagenesis and time-resolved absorption and ultraviolet resonance Raman (UVRR) spectroscopy. The Trpalpha14... Thralpha67 and Trpbeta15... Serbeta72 H-bonds connect the A and E helices in the alpha and beta chains, and are proposed to break in the earliest protein intermediate (R-deoxy) following photo-deligation of HbCO, along with a second pair of H-bonds involving tyrosine residues. Mutation of the acceptor residues Thralpha67 and Serbeta72 to Val and Ala eliminates the A-E H-bonds, but has been shown to have no significant effect on ligand-binding affinity or cooperativity, or on spectroscopic markers of the T-state quaternary interactions. However, the mutations have profound and unexpected effects on the character of the R-deoxy intermediate, and on the dynamics of the subsequent steps leading to the T state. Formation of the initial quaternary contact (R-T intermediate) is accelerated, by an order of magnitude, but the locking-in of the T state is delayed by a factor of 2. These rate effects are essentially the same for either mutation, or for the double mutation, suggesting that the up dimer behaves as a mechanically coupled dynamical unit. Further evidence for intra-dimer coupling is provided by the Rdeoxy UVRR spectrum, in which either or both mutations eliminate the tyrosine difference intensity, although only tryptophan H-bonds are directly affected. A possible mechanism for mechanical coupling is outlined, involving transmission of forces through the alpha(1)beta(1), (and alpha(2)beta(2) interface. The present observations establish that quaternary motions can occur on the similar to100 ns time-scale. They show also that a full complement of interhelical H-bonds actually slows the initial quaternary motion in Hb, but accelerates the locking in of the T-contacts. (C) 2004 Published by Elsevier Ltd.
引用
收藏
页码:857 / 868
页数:12
相关论文
共 35 条
[1]  
Ackers GK, 2000, PROTEINS, P23
[2]   Single residue modification of only one dimer within the hemoglobin tetramer reveals autonomous dimer function [J].
Ackers, GK ;
Dalessio, PM ;
Lew, GH ;
Daugherty, MA ;
Holt, JM .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (15) :9777-9782
[3]  
BALAKRISHNAN G, 2004, J MOL BIOL, V340
[4]   HEMOGLOBIN - STRUCTURAL-CHANGES RELATED TO LIGAND-BINDING AND ITS ALLOSTERIC MECHANISM [J].
BALDWIN, J ;
CHOTHIA, C .
JOURNAL OF MOLECULAR BIOLOGY, 1979, 129 (02) :175-+
[5]   Effects of amino acid substitutions at β131 on the structure and properties of hemoglobin:: Evidence for communication between α1β1- and α1β2-subunit interfaces [J].
Chang, CK ;
Simplaceanu, V ;
Ho, C .
BIOCHEMISTRY, 2002, 41 (17) :5644-5655
[6]   THE CRYSTAL-STRUCTURE OF HUMAN DEOXYHEMOGLOBIN AT 1.74A RESOLUTION [J].
FERMI, G ;
PERUTZ, MF ;
SHAANAN, B ;
FOURME, R .
JOURNAL OF MOLECULAR BIOLOGY, 1984, 175 (02) :159-174
[7]   Assignment of protoheme Resonance Raman spectrum by heme labeling in myoglobin [J].
Hu, SZ ;
Smith, KM ;
Spiro, TG .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1996, 118 (50) :12638-12646
[8]   Nanosecond step-scan FTIR spectroscopy of hemoglobin: Ligand recombination and protein conformational changes [J].
Hu, XH ;
Frei, H ;
Spiro, TG .
BIOCHEMISTRY, 1996, 35 (40) :13001-13005
[9]   Tyrosine and tryptophan structure markers in hemoglobin ultraviolet resonance Raman spectra: Mode assignments via subunit-specific isotope labeling of recombinant protein [J].
Hu, XH ;
Spiro, TG .
BIOCHEMISTRY, 1997, 36 (50) :15701-15712
[10]   Quaternary structure sensitive tyrosine interactions in hemoglobin: A UV resonance Raman study of the double mutant rHb (beta 99Asp->Asn, alpha 42Tyr->Asp) [J].
Huang, SC ;
Peterson, ES ;
Ho, C ;
Friedman, JM .
BIOCHEMISTRY, 1997, 36 (20) :6197-6206