The skeletal muscle Ca2+ release channel has an oxidoreductase-like domain

被引:56
作者
Baker, ML
Serysheva, II
Sencer, S
Wu, YL
Ludtke, SJ
Jiang, W
Hamilton, SL
Chiu, W
机构
[1] Baylor Coll Med, Program Struct & Computat Biol & Mol Biophys, Houston, TX 77030 USA
[2] Baylor Coll Med, Natl Ctr Macromol Imaging, Verna & Marrs Mclean Dept Biochem & Mol Biol, Houston, TX 77030 USA
[3] Baylor Coll Med, Dept Physiol & Mol Biophys, Houston, TX 77030 USA
关键词
D O I
10.1073/pnas.182058899
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 [理学]; 0710 [生物学]; 09 [农学];
摘要
We used a combination of bioinformatics, electron cryomicroscopy, and biochemical techniques to identify an oxidoreductase-like domain in the skeletal muscle Ca2+ release channel protein (RyR1). The initial prediction was derived from sequence-based fold recognition for the N-terminal region (41-420) of RyR1. The putative domain was computationally localized to the clamp domain in the cytoplasmic region of a 22Angstrom structure of RyR1. This localization was subsequently confirmed by difference imaging with a sequence specific antibody. Consistent with the prediction of an oxicloreductase domain, RyR1 binds [H-3]NAD(+), supporting a model in which RyR1 has a oxidoreductase-like domain that could function as a type of redox sensor.
引用
收藏
页码:12155 / 12160
页数:6
相关论文
共 38 条
[1]
OXIDATION INDUCED BY PHTHALOCYANINE DYES CAUSES RAPID CALCIUM RELEASE FROM SARCOPLASMIC-RETICULUM VESICLES [J].
ABRAMSON, JJ ;
CRONIN, JR ;
SALAMA, G .
ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS, 1988, 263 (02) :245-255
[2]
[Anonymous], 1996, 3 DIMENSIONAL ELECT
[3]
The PROSITE database, its status in 1997 [J].
Bairoch, A ;
Bucher, P ;
Hofmann, K .
NUCLEIC ACIDS RESEARCH, 1997, 25 (01) :217-221
[4]
MUTAGENESIS AND LAUE STRUCTURES OF ENZYME INTERMEDIATES - ISOCITRATE DEHYDROGENASE [J].
BOLDUC, JM ;
DYER, DH ;
SCOTT, WG ;
SINGER, P ;
SWEET, RM ;
KOSHLAND, DE ;
STODDARD, BL .
SCIENCE, 1995, 268 (5215) :1312-1318
[5]
Chen RD, 1996, PROTEIN SCI, V5, P287
[6]
CRYO-ELECTRON MICROSCOPY OF VITRIFIED SPECIMENS [J].
DUBOCHET, J ;
ADRIAN, M ;
CHANG, JJ ;
HOMO, JC ;
LEPAULT, J ;
MCDOWALL, AW ;
SCHULTZ, P .
QUARTERLY REVIEWS OF BIOPHYSICS, 1988, 21 (02) :129-228
[7]
Crystal structures of bovine milk xanthine dehydrogenase and xanthine oxidase: Structure-based mechanism of conversion [J].
Enroth, C ;
Eger, BT ;
Okamoto, K ;
Nishino, T ;
Nishino, T ;
Pai, EF .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2000, 97 (20) :10723-10728
[8]
Fischer D, 1996, PROTEIN SCI, V5, P947
[9]
SWISS-MODEL and the Swiss-PdbViewer: An environment for comparative protein modeling [J].
Guex, N ;
Peitsch, MC .
ELECTROPHORESIS, 1997, 18 (15) :2714-2723
[10]
Structure of a voltage-dependent K+ channel β subunit [J].
Gulbis, JM ;
Mann, S ;
MacKinnon, R .
CELL, 1999, 97 (07) :943-952