X-ray structure determination of a metastable state of carbonmonoxy myoglobin after photodissociation

被引:144
作者
Hartmann, H
Zinser, S
Komninos, P
Schneider, RT
Nienhaus, GU
Parak, F
机构
[1] TECH UNIV MUNICH,FAK PHYS,D-85747 GARCHING,GERMANY
[2] UNIV MAINZ,INST MOLEC BIOPHYS,D-55099 MAINZ,GERMANY
[3] DESY,EUROPEAN MOLEC BIOL LAB,OUTSTN HAMBURG,D-22603 HAMBURG,GERMANY
[4] UNIV ILLINOIS,DEPT PHYS,URBANA,IL 61801
关键词
protein dynamics; r/t-transition; low temperature structure;
D O I
10.1073/pnas.93.14.7013
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The x-ray structure of carbon monoxide (CO)ligated myoglobin illuminated during data collection by a laser diode at the wavelength lambda = 690 nm has been determined to a resolution of 1.7 A at T = 36 K. For comparison, we also measured data sets of deoxymyoglobin and CO-ligated myoglobin. In the photon-induced structure the electron density associated with the CO ligand can be described by a tube extending from the iron into the heme pocket over more than 4 A. This density can be interpreted by two discrete positions of the CO molecule. One is close to the heme iron and can be identified to be bound CO. In the second, the CO is dissociated from the heme iron and lies on top of pyrrole ring C. At our experimental conditions the overall structure of myoglobin in the metastable state is close to the structure of a CO-ligated molecule. However, the iron has essentially relaxed into the position of deoxymyoglobin. We compare our results with those of Schlichting et al. [Schlichting, I., Berendzen, J., Phillips, G, N., Jr., & Sweet, R. M. (1994) Nature 317, 808-812], who worked with the myoglobin mutant (D122N) that crystallizes in the space group P6 and Teng et al., [Teng, T. Y., Srajer, V. & Moffat, K. (1994) Nat. Struct. Biol. 1, 701-705], who used native myoglobin crystals of the space group P2(1). Possible reasons for the structural differences are discussed.
引用
收藏
页码:7013 / 7016
页数:4
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