Evidence that chytrids dominate fungal communities in high-elevation soils

被引:138
作者
Freeman, K. R. [1 ]
Martin, A. P. [1 ]
Karki, D. [2 ]
Lynch, R. C. [1 ]
Mitter, M. S. [1 ]
Meyer, A. F. [1 ]
Longcore, J. E. [3 ]
Simmons, D. R. [3 ]
Schmidt, S. K. [1 ]
机构
[1] Univ Colorado, Dept Ecol & Evolutionary Biol, Boulder, CO 80309 USA
[2] Tribhuvan Univ, Cent Dept Bot, Kathmandu, Nepal
[3] Univ Maine, Sch Biol & Ecol, Orono, ME 04469 USA
基金
美国国家科学基金会;
关键词
alpine ecology; glacial retreat; nival zone; psychrophiles; 18S RIBOSOMAL-RNA; DIVERSITY; BACTERIAL; VALLEY; ORDER; CHYTRIDIOMYCOTA; BIODIVERSITY; SUCCESSION; CATCHMENT; RESPONSES;
D O I
10.1073/pnas.0907303106
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Periglacial soils are one of the least studied ecosystems on Earth, yet they are widespread and are increasing in area due to retreat of glaciers worldwide. Soils in these environments are cold and during the brief summer are exposed to high levels of UV radiation and dramatic fluctuations in moisture and temperature. Recent research suggests that these environments harbor immense microbial diversity. Here we use sequencing of environmental DNA, culturing of isolates, and analysis of environmental variables to show that members of the Chytridiomycota (chytrids) dominate fungal biodiversity and perhaps decomposition processes in plant-free, high-elevation soils from the highest mountain ranges on Earth. The zoosporic reproduction of chytrids requires free water, yet we found that chytrids constituted over 70% of the ribosomal gene sequences of clone libraries from barren soils of the Himalayas and Rockies; by contrast, they are rare in other soil environments. Very few chytrids have been cultured, although we were successful at culturing chytrids from high-elevation sites throughout the world. In a more focused study of our sites in Colorado, we show that carbon sources that support chytrid growth (eolian deposited pollen and microbial phototrophs) are abundant and that soils are saturated with water for several months under the snow, thus creating ideal conditions for the development of a chytrid-dominated ecosystem. Our work broadens the known biodiversity of the Chytridomycota, and describes previously unsuspected links between aquatic and terrestrial ecosystems in alpine regions.
引用
收藏
页码:18315 / 18320
页数:6
相关论文
共 40 条
[1]   Dominant bacteria in soils of Marble Point and Wright Valley, Victoria Land, Antarctica [J].
Aislabie, Jackie. M. ;
Chhour, Kim-Ly ;
Saul, David J. ;
Miyauchi, Shingo ;
Ayton, Julie ;
Paetzold, Ron F. ;
Balks, Megan R. .
SOIL BIOLOGY & BIOCHEMISTRY, 2006, 38 (10) :3041-3056
[2]  
Anderson IC, 2003, ENVIRON MICROBIOL, V5, P1121, DOI [10.1046/j.1462-2920.2003.00522.x, 10.1046/j.1462-2920.2003.00383.x]
[3]   Settling speed of corn (Zea mays) pollen [J].
Aylor, DE .
JOURNAL OF AEROSOL SCIENCE, 2002, 33 (11) :1601-1607
[4]   Potential impacts of a warming climate on water availability in snow-dominated regions [J].
Barnett, TP ;
Adam, JC ;
Lettenmaier, DP .
NATURE, 2005, 438 (7066) :303-309
[5]   Soil fungal community composition at Mars Oasis, a southern maritime Antarctic site, assessed by PCR amplification and cloning [J].
Bridge, Paul D. ;
Newsham, Kevin K. .
FUNGAL ECOLOGY, 2009, 2 :66-74
[6]   Fumarole-Supported Islands of Biodiversity within a Hyperarid, High-Elevation Landscape on Socompa Volcano, Puna de Atacama, Andes [J].
Costello, Elizabeth K. ;
Halloy, Stephan R. P. ;
Reed, Sasha C. ;
Sowell, Preston ;
Schmidt, Steven K. .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2009, 75 (03) :735-747
[7]   Antarctic Dry Valley mineral soils contain unexpectedly high levels of microbial biomass [J].
Cowan, DA ;
Russell, NJ ;
Mamais, A ;
Sheppard, DM .
EXTREMOPHILES, 2002, 6 (05) :431-436
[8]   Diversity of soil fungal communities of Cerrado and its closely surrounding agriculture fields [J].
de Castro, Alinne Pereira ;
Quirino, Betania Ferraz ;
Pappas, Georgios, Jr. ;
Kurokawa, Adriane Silva ;
Neto, Eduardo Leonardecz ;
Krueger, Ricardo Henrique .
ARCHIVES OF MICROBIOLOGY, 2008, 190 (02) :129-139
[9]   Application of denaturing gradient gel electrophoresis (DGGE) to study the diversity of marine picoeukaryotic assemblages and comparison of DGGE with other molecular techniques [J].
Díez, B ;
Pedrós-Alió, C ;
Marsh, TL ;
Massana, R .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2001, 67 (07) :2942-2951
[10]   ATMOSPHERIC DEPOSITION OF MACRONUTRIENTS BY POLLEN AT A SEMI-REMOTE SITE IN NORTHERN WISCONSIN [J].
DOSKEY, PV ;
UGOAGWU, BJ .
ATMOSPHERIC ENVIRONMENT, 1989, 23 (12) :2761-2766