The evolutionary consequences of erroneous protein synthesis

被引:379
作者
Drummond, D. Allan [3 ]
Wilke, Claus O. [1 ,2 ]
机构
[1] Univ Texas Austin, Ctr Computat Biol & Bioinformat, Inst Cell & Mol Biol, Austin, TX 78712 USA
[2] Univ Texas Austin, Sect Integrat Biol, Austin, TX 78712 USA
[3] Harvard Univ, FAS Ctr Syst Biol, Cambridge, MA 02138 USA
基金
美国国家卫生研究院;
关键词
TRANSFER-RNA SYNTHETASE; SYNONYMOUS CODON USAGE; GENETIC-VARIATION; ESCHERICHIA-COLI; POPULATION-GENETICS; EXPRESSION LEVELS; MISTRANSLATION; ERRORS; YEAST; SELECTION;
D O I
10.1038/nrg2662
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Errors in protein synthesis disrupt cellular fitness, cause disease phenotypes and shape gene and genome evolution. Experimental and theoretical results on this topic have accumulated rapidly in disparate fields, such as neurobiology, protein biosynthesis and degradation and molecular evolution, but with limited communication among disciplines. Here, we review studies of error frequencies, the cellular and organismal consequences of errors and the attendant long-range evolutionary responses to errors. We emphasize major areas in which little is known, such as the failure rates of protein folding, in addition to areas in which technological innovations may enable imminent gains, such as the elucidation of translational missense error frequencies. Evolutionary responses to errors fall into two broad categories: adaptations that minimize errors and their attendant costs and adaptations that exploit errors for the organism's benefit.
引用
收藏
页码:715 / 724
页数:10
相关论文
共 100 条
[1]   Comparative analysis of the Saccharomyces cerevisiae and Caenorhabditis elegans protein interaction networks -: art. no. 23 [J].
Agrafioti, I ;
Swire, J ;
Abbott, J ;
Huntley, D ;
Butcher, S ;
Stumpf, MPH .
BMC EVOLUTIONARY BIOLOGY, 2005, 5 (1)
[2]  
AKASHI H, 1994, GENETICS, V136, P927
[3]   Evidence that gene amplification underlies adaptive mutability of the bacterial lac operon [J].
Andersson, DI ;
Slechta, ES ;
Roth, JR .
SCIENCE, 1998, 282 (5391) :1133-1135
[4]   Dissecting eukaryotic translation and its control by ribosome density mapping [J].
Arava, Y ;
Boas, FE ;
Brown, PO ;
Herschlag, D .
NUCLEIC ACIDS RESEARCH, 2005, 33 (08) :2421-2432
[5]   Genetic robustness and selection at the protein level for synonymous codons [J].
Archetti, M .
JOURNAL OF EVOLUTIONARY BIOLOGY, 2006, 19 (02) :353-365
[6]   Selection on codon usage for error minimization at the protein level [J].
Archetti, M .
JOURNAL OF MOLECULAR EVOLUTION, 2004, 59 (03) :400-415
[7]   An editing-defective aminoacyl-tRNA synthetase is mutagenic in aging bacteria via the SOS response [J].
Bacher, Jamie M. ;
Schimmel, Paul .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2007, 104 (06) :1907-1912
[8]   Inhibited cell growth and protein functional changes from an editing-defective tRNA synthetase [J].
Bacher, JM ;
de Crécy-Lagard, V ;
Schimmel, PR .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2005, 102 (05) :1697-1701
[9]   Robustness-epistasis link shapes the fitness landscape of a randomly drifting protein [J].
Bershtein, Shimon ;
Segal, Michal ;
Bekerman, Roy ;
Tokuriki, Nobuhiko ;
Tawfik, Dan S. .
NATURE, 2006, 444 (7121) :929-932
[10]   DRUG DEPENDENCE REVERSED BY A RIBOSOMAL AMBIGUITY MUTATION, RAM, IN ESCHERICHIA-COLI [J].
BJARE, U ;
GORINI, L .
JOURNAL OF MOLECULAR BIOLOGY, 1971, 57 (03) :423-&