Insights into molecular plasticity of choline binding proteins (pneumococcal surface proteins) by SAXS

被引:17
作者
Buey, Ruben M.
Monterroso, Begona
Menendez, Margarita
Diakun, Greg
Chacon, Pablo
Hermoso, Juan Antonio
Diaz, J. Fernando
机构
[1] Ctr Invest Biol, Consejo Super Invest Cient, Madrid 28040, Spain
[2] Inst Quim Fis, Consejo Super Invest Cientif, Madrid 28006, Spain
[3] CCLRC Daresbury Lab, Warrington WA4 4AD, Cheshire, England
关键词
choline binding proteins; three-dimensional solution structure; protein flexibility; small angle X-ray scattering; analytical ultracentrifugation;
D O I
10.1016/j.jmb.2006.09.091
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Phosphocholine moieties decorating the pneumococcal surface are used as a docking station for a family of modular proteins, the so-called choline binding proteins or CBPs. Choline recognition is essential for CBPs function and may also be a determinant for their quaternary structure. There is little knowledge about modular arrangement or oligomeric structures in this family. Therefore, we have used the small angle X-ray scattering (SAXS) technique combined with analytical ultracentrifugation in order to model the three-dimensional envelope of two highly different CBPs: the phage encoded Cpl-1 lysozyme and the pneumococcal phosphorylcholine esterase Pce. Both enzymes have an N-terminal catalytic module and a C-terminal choline-binding module (CBM) that attaches them to the bacterial surface and comprises six and ten sequence repeats in Cpl-1 and Pce, respectively. SAXS experiments have shown an inherent conformational plasticity in Cpl-1 that accounts for the different relative position of these regions in the solution and crystal structures. Dimerization of Cpl-1 upon choline binding has been also visualised for the first time, and monomer-monomer interactions take place through the first CBR where a non-canonical choline binding site has now been identified. This mode of association seems to be independent of the absence or presence of the Cpl-1 catalytic module and reveals that the arrangement of the monomers differs from that previously found in the isolated CBM dimer of pneumococcal LytA amidase. In contrast, Pce displays the same modular disposition in the solution and crystal structures, and remains almost invariant upon choline binding. The present results suggest that protein dimerization and duplication of CBRs may be alternative but not equivalent ways of improving cell wall recognition by CBPs, since they provide different interaction geometries for choline residues present in (lipo)teichoic acids. (c) 2006 Elsevier Ltd. All rights reserved.
引用
收藏
页码:411 / 424
页数:14
相关论文
共 59 条
[1]   ESSENTIAL DYNAMICS OF PROTEINS [J].
AMADEI, A ;
LINSSEN, ABM ;
BERENDSEN, HJC .
PROTEINS-STRUCTURE FUNCTION AND GENETICS, 1993, 17 (04) :412-425
[2]  
Brooks-Walter A, 1999, INFECT IMMUN, V67, P6533
[3]   Reconstruction of protein form with X-ray solution scattering and a genetic algorithm [J].
Chacón, P ;
Díaz, JF ;
Morán, F ;
Andreu, JM .
JOURNAL OF MOLECULAR BIOLOGY, 2000, 299 (05) :1289-1302
[4]   Low-resolution structures of proteins in solution retrieved from X-ray scattering with a genetic algorithm [J].
Chacón, P ;
Morán, F ;
Díaz, JF ;
Pantos, E ;
Andreu, JM .
BIOPHYSICAL JOURNAL, 1998, 74 (06) :2760-2775
[5]   PNEUMOCOCCAL SURFACE PROTEIN-A (PSPA) IS SEROLOGICALLY HIGHLY VARIABLE AND IS EXPRESSED BY ALL CLINICALLY IMPORTANT CAPSULAR SEROTYPES OF STREPTOCOCCUS-PNEUMONIAE [J].
CRAIN, MJ ;
WALTMAN, WD ;
TURNER, JS ;
YOTHER, J ;
TALKINGTON, DF ;
MCDANIEL, LS ;
GRAY, BM ;
BRILES, DE .
INFECTION AND IMMUNITY, 1990, 58 (10) :3293-3299
[6]   Conformational changes in the chaperonin GroEL: New insights into the allosteric mechanism [J].
de Groot, BL ;
Vriend, G ;
Berendsen, HJC .
JOURNAL OF MOLECULAR BIOLOGY, 1999, 286 (04) :1241-1249
[7]   Calculation of hydrodynamic properties of globular proteins from their atomic-level structure [J].
de la Torre, JG ;
Huertas, ML ;
Carrasco, B .
BIOPHYSICAL JOURNAL, 2000, 78 (02) :719-730
[8]   Molecular characterization of the pneumococcal teichoic acid phosphorylcholine esterase [J].
de las Rivas, B ;
García, JL ;
López, R ;
García, P .
MICROBIAL DRUG RESISTANCE-MECHANISMS EPIDEMIOLOGY AND DISEASE, 2001, 7 (03) :213-222
[9]  
deGroot BL, 1997, PROTEINS, V29, P240, DOI 10.1002/(SICI)1097-0134(199710)29:2<240::AID-PROT11>3.0.CO
[10]  
2-O