A curated compendium of phosphorylation motifs

被引：313

作者：

Amanchy, Ramars ^{[1
]}

Periaswamy, Balamurugan

Mathivanan, Suresh

Reddy, Raghunath

Tattikota, Sudhir Gopal

Pandey, Akhilesh

机构：

[1] Johns Hopkins Univ, McKusick Nathans Inst Genet Med, Baltimore, MD 21205 USA

[2] Johns Hopkins Univ, Dept Biol Chem, Baltimore, MD 21205 USA

[3] Johns Hopkins Univ, Dept Oncol, Baltimore, MD 21205 USA

[4] Johns Hopkins Univ, Dept Pathol, Baltimore, MD 21205 USA

[5] Inst Bioinformat, Bangalore 560066, Karnataka, India

来源：

NATURE BIOTECHNOLOGY | 2007年 / 25卷 / 03期

关键词：

D O I：

10.1038/nbt0307-285

中图分类号：

Q81 [生物工程学（生物技术）]; Q93 [微生物学];

学科分类号：

071005 ; 0836 ; 090102 ; 100705 ;

摘要：

引用

页码：285 / 286

页数：2

共 11 条

[1] Prediction of post-translational glycosylation and phosphorylation of proteins from the amino acid sequence [J].

Blom, N ;

Sicheritz-Pontén, T ;

Gupta, R ;

Gammeltoft, S ;

Brunak, S .

PROTEOMICS, 2004, 4 (06) :1633-1649

[2] SIGNAL INTEGRATION AT THE LEVEL OF PROTEIN-KINASES, PROTEIN PHOSPHATASES AND THEIR SUBSTRATES [J].

COHEN, P .

TRENDS IN BIOCHEMICAL SCIENCES, 1992, 17 (10) :408-413

[3] Phospho.ELM:: A database of experimentally verified phosphorylation sites in eukaryotic proteins -: art. no. 79 [J].

Diella, F ;

Cameron, S ;

Gemünd, C ;

Linding, R ;

Via, A ;

Kuster, B ;

Sicheritz-Pontén, T ;

Blom, N ;

Gibson, TJ .

BMC BIOINFORMATICS, 2004, 5 (1)

[4] KinasePhos: a web tool for identifying protein kinase-specific phosphorylation sites [J].

Huang, HD ;

Lee, TY ;

Tzeng, SW ;

Horng, JT .

NUCLEIC ACIDS RESEARCH, 2005, 33 :W226-W229

[5] A quantitative protein interaction network for the ErbB receptors using protein microarrays [J].

Jones, RB ;

Gordus, A ;

Krall, JA ;

MacBeath, G .

NATURE, 2006, 439 (7073) :168-174

[6] Substrate specificity of protein kinases and computational prediction of substrates [J].

Kobe, B ;

Kampmann, T ;

Forwood, JK ;

Listwan, P ;

Worth, RI .

BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS, 2005, 1754 (1-2) :200-209

[7] Scansite 2.0: proteome-wide prediction of cell signaling interactions using short sequence motifs [J].

Obenauer, JC ;

Cantley, LC ;

Yaffe, MB .

NUCLEIC ACIDS RESEARCH, 2003, 31 (13) :3635-3641

[8] SH2 domains, interaction modules and cellular wiring [J].

Pawson, T ;

Gish, GD ;

Nash, P .

TRENDS IN CELL BIOLOGY, 2001, 11 (12) :504-511

[9] Development of human protein reference database as an initial platform for approaching systems biology in humans [J].

Peri, S ;

Navarro, JD ;

Amanchy, R ;

Kristiansen, TZ ;

Jonnalagadda, CK ;

Surendranath, V ;

Niranjan, V ;

Muthusamy, B ;

Gandhi, TKB ;

Gronborg, M ;

Ibarrola, N ;

Deshpande, N ;

Shanker, K ;

Shivashankar, HN ;

Rashmi, BP ;

Ramya, MA ;

Zhao, ZX ;

Chandrika, KN ;

Padma, N ;

Harsha, HC ;

Yatish, AJ ;

Kavitha, MP ;

Menezes, M ;

Choudhury, DR ;

Suresh, S ;

Ghosh, N ;

Saravana, R ;

Chandran, S ;

Krishna, S ;

Joy, M ;

Anand, SK ;

Madavan, V ;

Joseph, A ;

Wong, GW ;

Schiemann, WP ;

Constantinescu, SN ;

Huang, LL ;

Khosravi-Far, R ;

Steen, H ;

Tewari, M ;

Ghaffari, S ;

Blobe, GC ;

Dang, CV ;

Garcia, JGN ;

Pevsner, J ;

Jensen, ON ;

Roepstorff, P ;

Deshpande, KS ;

Chinnaiyan, AM ;

Hamosh, A .

GENOME RESEARCH, 2003, 13 (10) :2363-2371

[10] A motif-based profile scanning approach for genome-wide prediction of signaling pathways [J].

Yaffe, MB ;

Leparc, GG ;

Lai, J ;

Obata, T ;

Volinia, S ;

Cantley, LC .

NATURE BIOTECHNOLOGY, 2001, 19 (04) :348-353

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