Citrobacter freundii tyrosine phenol-lyase:: the role of asparagine 185 in modulating enzyme function through stabilization of a quinonoid intermediate

被引:15
作者
Barbolina, MV
Phillips, RS
Gollnick, PD
Faleev, NG
Demidkina, TV
机构
[1] VA Engelhardt Mol Biol Inst, Moscow 117984, Russia
[2] Univ Georgia, Dept Chem, Athens, GA 30602 USA
[3] Univ Georgia, Dept Biochem & Mol Biol, Athens, GA 30602 USA
[4] Univ Georgia, Ctr Metalloenzyme Studies, Athens, GA 30602 USA
[5] SUNY Buffalo, Dept Biol Sci, Buffalo, NY 14260 USA
[6] AN Nesmeyanov Organoelement Cpds Inst, Moscow 117813, Russia
来源
PROTEIN ENGINEERING | 2000年 / 13卷 / 03期
关键词
beta-elimination; lyases; mutagenesis; pyridoxal 5 '-phosphate; tyrosine;
D O I
10.1093/protein/13.3.207
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Asn185 is an invariant residue in all known sequences of TPL and of closely related tryptophanase and it may be aligned with the Asn194 in aspartate aminotransferase. According to X-ray data, in the holoenzyme and in the Michaelis complex Asn185 does not interact with the cofactor pyridoxal 5'-phosphate, but in the external aldimine a conformational change occurs which is accompanied by formation of a hydrogen bond between Asn185 and the oxygen atom in position 3 of the cofactor. The substitution of Asn185 in TPL by alanine results in a mutant N185A TPL of moderate residual activity (2%) with respect to adequate substrates, L-tyrosine and 3-fluoro-L-tyrosine, The affinities of the mutant enzyme for various amino acid substrates and inhibitors, studied by both steady-state and rapid kinetic techniques, were lower than for the wild-type TPL, This effect mainly results from destabilization of the quinonoid intermediate, and it is therefore concluded that the hydrogen bond between Asn185 and the oxygen at the C-3 position of the cofactor is maintained in the quinonoid intermediate. The relative destabilization of the quinonoid intermediate and external aldimine leads to the formation of large amounts of gem-diamine in reactions of N185A TPL with 3-fluoro-L-tyrosine and L-phenylalanine. For the reaction with 3-fluoro-L-tyrosine it was first possible to determine kinetic parameters of gem-diamine formation by the stopped-flow method. For the reactions of N185A TPL with substrates bearing good leaving groups the observed values of k(cat) could be accounted for by taking into consideration two effects: the decrease in the quinonoid content under steady-state conditions and the increase in the quinonoid reactivity in a beta-elimination reaction. Both effects are due to destabilization of the quinonoid and they counterbalance each other. Multiple kinetic isotope effect studies on the reactions of N185A TPL with suitable substrates, L-tyrosine and 3-fluoro-L-tyrosine, show that the principal mechanism of catalysis, suggested previously for the wild-type enzyme, does not change, In the framework of this mechanism the observed considerable decrease in k(cat) values for reactions of N185A TPL with L-tyrosine and 3-fluoro-L-tyrosine may be ascribed to participation of Asn185 in additional stabilization of the keto quinonoid intermediate. (C) Oxford University Press.
引用
收藏
页码:207 / 215
页数:9
相关论文
共 32 条
[1]   3-DIMENSIONAL STRUCTURE OF TYROSINE PHENOL-LYASE [J].
ANTSON, AA ;
DEMIDKINA, TV ;
GOLLNICK, P ;
DAUTER, Z ;
VONTERSCH, RL ;
LONG, J ;
BEREZHNOY, SN ;
PHILLIPS, RS ;
HARUTYUNYAN, EH ;
WILSON, KS .
BIOCHEMISTRY, 1993, 32 (16) :4195-4206
[2]   SITE-DIRECTED MUTAGENESIS OF TYROSINE-71 TO PHENYLALANINE IN CITROBACTER-FREUNDII TYROSINE PHENOL-LYASE - EVIDENCE FOR DUAL ROLES OF TYROSINE-71 AS A GENERAL ACID CATALYST IN THE REACTION-MECHANISM AND IN COFACTOR BINDING [J].
CHEN, HY ;
DEMIDKINA, TV ;
PHILLIPS, RS .
BIOCHEMISTRY, 1995, 34 (38) :12276-12283
[3]  
CHEN HY, 1995, EUR J BIOCHEM, V229, P540, DOI 10.1111/j.1432-1033.1995.tb20496.x
[4]  
Cleland W W, 1979, Methods Enzymol, V63, P103
[5]   TRANSAMINATION CATALYZED BY TYROSINE PHENOL-LYASE FROM CITROBACTER-INTERMEDIUS [J].
DEMIDKINA, TV ;
MYAGKIKH, IV ;
AZHAYEV, AV .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 1987, 170 (1-2) :311-316
[6]   MICROBIOLOGICAL SYNTHESIS OF L-TYROSINE AND 3,4-DIHYDROXYPHENYL-L-ALANINE .1. DISTRIBUTION OF TYROSINE PHENOL LYASE IN MICROORGANISMS [J].
ENEI, H ;
OKUMURA, S ;
YAMASHITA, K ;
YAMADA, H ;
MATSUI, H .
AGRICULTURAL AND BIOLOGICAL CHEMISTRY, 1972, 36 (11) :1861-+
[7]   TYROSINE PHENOL-LYASE FROM CITROBACTER-INTERMEDIUS - FACTORS CONTROLLING SUBSTRATE-SPECIFICITY [J].
FALEEV, NG ;
RUVINOV, SB ;
DEMIDKINA, TV ;
MYAGKIKH, IV ;
GOLOLOBOV, MY ;
BAKHMUTOV, VI ;
BELIKOV, VM .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 1988, 177 (02) :395-401
[8]  
FALEEV NG, 1996, J CHEM SOC P2, V2, P2001
[9]   THE EVALUATION OF THE KINETIC CONSTANTS OF ENZYME CATALYZED REACTIONS [J].
FOSTER, RJ ;
NIEMANN, C .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1953, 39 (10) :999-1003
[10]   USE OF GLASS ELECTRODES TO MEASURE ACIDITIES IN DEUTERIUM OXIDE [J].
GLASOE, PK ;
LONG, FA .
JOURNAL OF PHYSICAL CHEMISTRY, 1960, 64 (01) :188-190