Pitfalls in the use of DNA microarray data for diagnostic and prognostic classification

被引:728
作者
Simon, R
Radmacher, MD
Dobbin, K
McShane, LM
机构
[1] NCI, Biometr Res Branch, NIH, Bethesda, MD 20892 USA
[2] Kenyon Coll, Dept Biol, Gambier, OH USA
[3] Kenyon Coll, Dept Math, Gambier, OH USA
关键词
D O I
10.1093/jnci/95.1.14
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
[No abstract available]
引用
收藏
页码:14 / 18
页数:5
相关论文
共 22 条
  • [1] Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling
    Alizadeh, AA
    Eisen, MB
    Davis, RE
    Ma, C
    Lossos, IS
    Rosenwald, A
    Boldrick, JG
    Sabet, H
    Tran, T
    Yu, X
    Powell, JI
    Yang, LM
    Marti, GE
    Moore, T
    Hudson, J
    Lu, LS
    Lewis, DB
    Tibshirani, R
    Sherlock, G
    Chan, WC
    Greiner, TC
    Weisenburger, DD
    Armitage, JO
    Warnke, R
    Levy, R
    Wilson, W
    Grever, MR
    Byrd, JC
    Botstein, D
    Brown, PO
    Staudt, LM
    [J]. NATURE, 2000, 403 (6769) : 503 - 511
  • [2] Classification of human lung carcinomas by mRNA expression profiling reveals distinct adenocarcinoma subclasses
    Bhattacharjee, A
    Richards, WG
    Staunton, J
    Li, C
    Monti, S
    Vasa, P
    Ladd, C
    Beheshti, J
    Bueno, R
    Gillette, M
    Loda, M
    Weber, G
    Mark, EJ
    Lander, ES
    Wong, W
    Johnson, BE
    Golub, TR
    Sugarbaker, DJ
    Meyerson, M
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (24) : 13790 - 13795
  • [3] Molecular classification of cutaneous malignant melanoma by gene expression profiling
    Bittner, M
    Meitzer, P
    Chen, Y
    Jiang, Y
    Seftor, E
    Hendrix, M
    Radmacher, M
    Simon, R
    Yakhini, Z
    Ben-Dor, A
    Sampas, N
    Dougherty, E
    Wang, E
    Marincola, F
    Gooden, C
    Lueders, J
    Glatfelter, A
    Pollock, P
    Carpten, J
    Gillanders, E
    Leja, D
    Dietrich, K
    Beaudry, C
    Berens, M
    Alberts, D
    Sondak, V
    Hayward, N
    Trent, J
    [J]. NATURE, 2000, 406 (6795) : 536 - 540
  • [4] Breiman L., 1984, BIOMETRICS, DOI DOI 10.2307/2530946
  • [5] Cancer - The molecular outlook
    Caldas, C
    Aparicio, SAJ
    [J]. NATURE, 2002, 415 (6871) : 484 - 485
  • [6] Comparison of discrimination methods for the classification of tumors using gene expression data
    Dudoit, S
    Fridlyand, J
    Speed, TP
    [J]. JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, 2002, 97 (457) : 77 - 87
  • [7] Improvements on cross-validation: The .632+ bootstrap method
    Efron, B
    Tibshirani, R
    [J]. JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, 1997, 92 (438) : 548 - 560
  • [8] Diversity of gene expression in adenocarcinoma of the lung
    Garber, ME
    Troyanskaya, OG
    Schluens, K
    Petersen, S
    Thaesler, Z
    Pacyna-Gengelbach, M
    van de Rijn, M
    Rosen, GD
    Perou, CM
    Whyte, RI
    Altman, RB
    Brown, PO
    Botstein, D
    Petersen, I
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (24) : 13784 - 13789
  • [9] Molecular classification of cancer: Class discovery and class prediction by gene expression monitoring
    Golub, TR
    Slonim, DK
    Tamayo, P
    Huard, C
    Gaasenbeek, M
    Mesirov, JP
    Coller, H
    Loh, ML
    Downing, JR
    Caligiuri, MA
    Bloomfield, CD
    Lander, ES
    [J]. SCIENCE, 1999, 286 (5439) : 531 - 537
  • [10] Gene-expression profiles in hereditary breast cancer.
    Hedenfalk, I
    Duggan, D
    Chen, YD
    Radmacher, M
    Bittner, M
    Simon, R
    Meltzer, P
    Gusterson, B
    Esteller, M
    Kallioniemi, OP
    Wilfond, B
    Borg, Å
    Trent, J
    Raffeld, M
    Yakhini, Z
    Ben-Dor, A
    Dougherty, E
    Kononen, J
    Bubendorf, L
    Fehrle, W
    Pittaluga, S
    Gruvberger, S
    Loman, N
    Johannsoson, O
    Olsson, H
    Sauter, G
    [J]. NEW ENGLAND JOURNAL OF MEDICINE, 2001, 344 (08) : 539 - 548