Experimental aspects of copy number variant assays at CCL3L1

被引：54

作者：

Field, Sarah F. ^{[1
]}

Howson, Joanna M. M. ^{[1
]}

Maier, Lisa M. ^{[2
,3
,4
,5
]}

Walker, Susan ^{[6
,7
]}

Walker, Neil M. ^{[1
]}

Smyth, Deborah J. ^{[1
]}

Armour, John A. L. ^{[6
,7
]}

Clayton, David G. ^{[1
]}

Todd, John A. ^{[1
]}

机构：

[1] Univ Cambridge, Dept Med Genet, Cambridge Inst Med Res,Juvenile Diabet Res Fdn, Wellcome Trust Diabet & Inflammat Lab, Cambridge, England

[2] Brigham & Womens Hosp, Ctr Neurol Dis, Div Mol Immunol, Boston, MA 02115 USA

[3] Harvard Univ, Sch Med, Boston, MA USA

[4] MIT, Broad Inst, Program Med & Populat Genet, Cambridge, MA 02139 USA

[5] Harvard Univ, Cambridge, MA 02138 USA

[6] Univ Nottingham, Queens Med Ctr, Inst Genet, Nottingham NG7 2RD, England

[7] Univ Nottingham, Queens Med Ctr, Sch Biol, Nottingham NG7 2RD, England

来源：

NATURE MEDICINE | 2009年 / 15卷 / 10期

基金：

英国惠康基金; 英国医学研究理事会;

关键词：

CONTAINING SEGMENTAL DUPLICATIONS; HIV-1; ASSOCIATION; CCL4L1; RISK;

D O I：

10.1038/nm1009-1115

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

引用

页码：1115 / 1117

页数：4

共 15 条

[1]

Ahuja SK, 2008, NAT MED, V14, P413, DOI 10.1038/nm1741

[2] Population structure, differential bias and genomic control in a large-scale, case-control association study [J].

Clayton, DG ;

Walker, NM ;

Smyth, DJ ;

Pask, R ;

Cooper, JD ;

Maier, LM ;

Smink, LJ ;

Lam, AC ;

Ovington, NR ;

Stevens, HE ;

Nutland, S ;

Howson, JMM ;

Faham, M ;

Moorhead, M ;

Jones, HB ;

Falkowski, M ;

Hardenbol, P ;

Willis, TD ;

Todd, JA .

NATURE GENETICS, 2005, 37 (11) :1243-1246

[3] Multiple products derived from two CCL4 loci:: High incidence of a new polymorphism in HIV+ patients [J].

Colobran, R ;

Adreani, P ;

Ashhab, Y ;

Llano, A ;

Esté, JA ;

Dominguez, O ;

Pujol-Borrell, R ;

Juan, M .

JOURNAL OF IMMUNOLOGY, 2005, 174 (09) :5655-5664

[4] CCL3L1 and CCR5 influence cell-mediated immunity and affect HIV-AIDS pathogenesis via viral entry-independent mechanisms [J].

Dolan, Matthew J. ;

Kulkarni, Hemant ;

Camargo, Jose F. ;

He, Weijing ;

Smith, Alison ;

Anaya, Juan-Manuel ;

Miura, Toshiyuki ;

Hecht, Frederick M. ;

Mamtani, Manju ;

Pereyra, Florencia ;

Marconi, Vincent ;

Mangano, Andrea ;

Sen, Luisa ;

Bologna, Rosa ;

Clark, Robert A. ;

Anderson, Stephanie A. ;

Delmar, Judith ;

O'Connell, Robert J. ;

Lloyd, Andrew ;

Martin, Jeffrey ;

Ahuja, Seema S. ;

Agan, Brian K. ;

Walker, Bruce D. ;

Deeks, Steven G. ;

Ahuja, Sunil K. .

NATURE IMMUNOLOGY, 2007, 8 (12) :1324-1336

[5] The influence of CCL3L1 gene-containing segmental duplications on HIV-1/AIDS susceptibility [J].

Gonzalez, E ;

Kulkarni, H ;

Bolivar, H ;

Mangano, A ;

Sanchez, R ;

Catano, G ;

Nibbs, RJ ;

Freedman, BI ;

Quinones, MP ;

Bamshad, MJ ;

Murthy, KK ;

Rovin, BH ;

Bradley, W ;

Clark, RA ;

Anderson, SA ;

O'Connell, RJ ;

Agan, BK ;

Ahuja, SS ;

Bologna, R ;

Sen, L ;

Dolan, MJ ;

Ahuja, SK .

SCIENCE, 2005, 307 (5714) :1434-1440

[6] Role of CCL3L1-CCR5 Genotypes in the Epidemic Spread of HIV-1 and Evaluation of Vaccine Efficacy [J].

Kulkarni, Hemant ;

Marconi, Vincent C. ;

Agan, Brian K. ;

McArthur, Carole ;

Crawford, George ;

Clark, Robert A. ;

Dolan, Matthew J. ;

Ahuja, Sunil K. .

PLOS ONE, 2008, 3 (11)

[7] CCL3L1 gene-containing segmental duplications and polymorphisms in CCR5 affect risk of systemic lupus erythaematosus [J].

Mamtani, M. ;

Rovin, B. ;

Brey, R. ;

Camargo, J. F. ;

Kulkarni, H. ;

Herrera, M. ;

Correa, P. ;

Holliday, S. ;

Anaya, J-M ;

Ahuja, S. K. .

ANNALS OF THE RHEUMATIC DISEASES, 2008, 67 (08) :1076-1083

[8] Integrated detection and population-genetic analysis of SNPs and copy number variation [J].

McCarroll, Steven A. ;

Kuruvilla, Finny G. ;

Korn, Joshua M. ;

Cawley, Simon ;

Nemesh, James ;

Wysoker, Alec ;

Shapero, Michael H. ;

de Bakker, Paul I. W. ;

Maller, Julian B. ;

Kirby, Andrew ;

Elliott, Amanda L. ;

Parkin, Melissa ;

Hubbell, Earl ;

Webster, Teresa ;

Mei, Rui ;

Veitch, James ;

Collins, Patrick J. ;

Handsaker, Robert ;

Lincoln, Steve ;

Nizzari, Marcia ;

Blume, John ;

Jones, Keith W. ;

Rava, Rich ;

Daly, Mark J. ;

Gabriel, Stacey B. ;

Altshuler, David .

NATURE GENETICS, 2008, 40 (10) :1166-1174

[9] Extending genome-wide association studies to copy-number variation [J].

McCarroll, Steven A. .

HUMAN MOLECULAR GENETICS, 2008, 17 :R135-R142

[10] CCL3L1 and CCL4L1 chemokine genes are located in a segmental duplication at chromosome 17ql2 [J].

Modi, WS .

GENOMICS, 2004, 83 (04) :735-738

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