Aptamers in the virologists' toolkit

被引:55
作者
James, William [1 ]
机构
[1] Univ Oxford, Sir William Dunn Sch Pathol, Oxford OX2 3RE, England
关键词
HEPATITIS-C-VIRUS; IN-VITRO SELECTION; HIV-1; REVERSE-TRANSCRIPTASE; AFFINITY RNA LIGANDS; NEUTRALIZES R5 STRAINS; CRYSTAL-STRUCTURE; APICAL LOOP; RECEPTOR-BINDING; DNA APTAMERS; VIRAL-RNA;
D O I
10.1099/vir.0.82442-0
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Aptamers are artificial nucleic acid ligands that can be generated in vitro against a wide range of molecules, including the gene products of viruses. Aptamers are isolated from complex libraries of synthetic nucleic acids by an iterative, cell-free process that involves repetitively reducing the complexity of the library by partitioning on the basis of selective binding to the target molecule, followed by reamplification. For virologists, aptamers have potential uses as tools to help to analyse the molecular biology of virus replication, as a complement to the more familiar monoclonal antibodies. They also have potential applications as diagnostic biosensors and in the development of antiviral agents. In recent years, these two promising avenues have been explored increasingly by virologists; here, the progress that has been made is reviewed.
引用
收藏
页码:351 / 364
页数:14
相关论文
共 119 条
[1]   Changes in retinal neovascularization after pegaptanib (Macugen) therapy in diabetic individuals [J].
Adamis, AP ;
Altaweel, M ;
Bressler, NM ;
Cunningham, ET ;
Davis, MD ;
Goldbaum, M ;
Gonzales, C ;
Guyer, DR ;
Katz, B ;
Patel, M .
OPHTHALMOLOGY, 2006, 113 (01) :23-28
[2]   Apical loop-internal loop interactions:: A new RNA-RNA recognition motif identified through in vitro selection against RNA hairpins of the hepatitis C virus mRNA [J].
Aldaz-Carroll, L ;
Tallet, A ;
Dausse, E ;
Yurchenko, L ;
Toulmé, JJ .
BIOCHEMISTRY, 2002, 41 (18) :5883-5893
[3]   DNA aptamers selected against the HIV-1 RNase H display in vitro antiviral activity [J].
Andreola, ML ;
Pileur, F ;
Calmels, C ;
Ventura, M ;
Tarrago-Litvak, L ;
Toulmé, JJ ;
Litvak, S .
BIOCHEMISTRY, 2001, 40 (34) :10087-10094
[4]   2'-FLUORO-2'-DEOXYNUCLEOSIDE AND 2'-AMINO-2'-DEOXYNUCLEOSIDE 5'-TRIPHOSPHATES AS SUBSTRATES FOR T7 RNA-POLYMERASE [J].
AURUP, H ;
WILLIAMS, DM ;
ECKSTEIN, F .
BIOCHEMISTRY, 1992, 31 (40) :9636-9641
[5]   Intravitreal bevacizumab (Avastin) for neovascular age-related macular degeneration [J].
Avery, RL ;
Pieramici, DJ ;
Rabena, MD ;
Castellarin, AA ;
Nasir, MA ;
Giust, MJ .
OPHTHALMOLOGY, 2006, 113 (03) :363-372
[6]   StreptoTag: A novel method for the isolation of RNA-binding proteins [J].
Bachler, M ;
Schroeder, R ;
von Ahsen, U .
RNA, 1999, 5 (11) :1509-1516
[7]   RNA-based anti-HIV-1 gene therapeutic constructs in SCID-hu mouse model [J].
Bai, JR ;
Banda, N ;
Lee, NS ;
Rossi, J ;
Akkina, R .
MOLECULAR THERAPY, 2002, 6 (06) :770-782
[8]   Lentiviral transduction of Tar Decoy and CCR5 ribozyme into CD34+ progenitor cells and derivation of HIV-1 resistant T cells and macrophages [J].
Banerjea A. ;
Li M.-J. ;
Remling L. ;
Rossi J. ;
Akkina R. .
AIDS Research and Therapy, 1 (1)
[9]   HIV-1 REV REGULATION INVOLVES RECOGNITION OF NON-WATSON-CRICK BASE-PAIRS IN VIRAL-RNA [J].
BARTEL, DP ;
ZAPP, ML ;
GREEN, MR ;
SZOSTAK, JW .
CELL, 1991, 67 (03) :529-536
[10]   HIGH-RESOLUTION MAPPING OF THE HUMAN T-CELL LEUKEMIA-VIRUS TYPE-1 REX-BINDING ELEMENT BY IN-VITRO SELECTION [J].
BASKERVILLE, S ;
ZAPP, M ;
ELLINGTON, AD .
JOURNAL OF VIROLOGY, 1995, 69 (12) :7559-7569