Gene copy number polymorphisms in an arbuscular mycorrhizal fungal population

被引:61
作者
Corradi, Nicolas [1 ]
Croll, Daniel [1 ]
Colard, Alexandre [1 ]
Kuhn, Gerrit [1 ]
Ehinger, Martine [1 ]
Sanders, Ian R. [1 ]
机构
[1] Univ Lausanne, Dept Ecol & Evolut, CH-1015 Lausanne, Switzerland
关键词
D O I
10.1128/AEM.01574-06
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Gene copy number polymorphism was studied in a population of the arbuscular mycorrhizal fungus Glomus intraradices by using a quantitative PCR approach on four different genomic regions. Variation in gene copy number was found for a pseudogene and for three ribosomal genes, providing conclusive evidence for a widespread occurrence of macromutational events in the population.
引用
收藏
页码:366 / 369
页数:4
相关论文
共 16 条
[1]   Copy number polymorphism in Fcgr3 predisposes to glomerulonephritis in rats and humans [J].
Aitman, TJ ;
Dong, R ;
Vyse, TJ ;
Norsworthy, PJ ;
Johnson, MD ;
Smith, J ;
Mangion, J ;
Roberton-Lowe, C ;
Marshall, AJ ;
Petretto, E ;
Hodges, MD ;
Bhangal, G ;
Patel, SG ;
Sheehan-Rooney, K ;
Duda, M ;
Cook, PR ;
Evans, DJ ;
Domin, J ;
Flint, J ;
Boyle, JJ ;
Pusey, CD ;
Cook, HT .
NATURE, 2006, 439 (7078) :851-855
[2]   RATE OF TURNOVER OF STRUCTURAL VARIANTS IN THE RDNA GENE FAMILY OF DROSOPHILA-MELANOGASTER [J].
COEN, ES ;
THODAY, JM ;
DOVER, G .
NATURE, 1982, 295 (5850) :564-568
[3]   Evolution of the P-type II ATPase gene family in the fungi and presence of structural genomic changes among isolates of Glomus intraradices [J].
Corradi, Nicolas ;
Sanders, Ian R. .
BMC EVOLUTIONARY BIOLOGY, 2006, 6 (1)
[4]   Evolution of drug resistance in experimental populations of Candida albicans [J].
Cowen, LE ;
Sanglard, D ;
Calabrese, D ;
Sirjusingh, C ;
Anderson, JB ;
Kohn, LM .
JOURNAL OF BACTERIOLOGY, 2000, 182 (06) :1515-1522
[5]   The influence of CCL3L1 gene-containing segmental duplications on HIV-1/AIDS susceptibility [J].
Gonzalez, E ;
Kulkarni, H ;
Bolivar, H ;
Mangano, A ;
Sanchez, R ;
Catano, G ;
Nibbs, RJ ;
Freedman, BI ;
Quinones, MP ;
Bamshad, MJ ;
Murthy, KK ;
Rovin, BH ;
Bradley, W ;
Clark, RA ;
Anderson, SA ;
O'Connell, RJ ;
Agan, BK ;
Ahuja, SS ;
Bologna, R ;
Sen, L ;
Dolan, MJ ;
Ahuja, SK .
SCIENCE, 2005, 307 (5714) :1434-1440
[6]   The arbuscular mycorrhizal fungus Glomus intraradices is haploid and has a small genome size in the lower limit of eukaryotes [J].
Hijri, M ;
Sanders, IR .
FUNGAL GENETICS AND BIOLOGY, 2004, 41 (02) :253-261
[7]   An expressed pseudogene regulates the messenger-RNA stability of its homologous coding gene [J].
Hirotsune, S ;
Yoshida, N ;
Chen, A ;
Garrett, L ;
Sugiyama, F ;
Takahashi, S ;
Yagami, K ;
Wynshaw-Boris, A ;
Yoshiki, A .
NATURE, 2003, 423 (6935) :91-96
[8]   Detection of large-scale variation in the human genome [J].
Iafrate, AJ ;
Feuk, L ;
Rivera, MN ;
Listewnik, ML ;
Donahoe, PK ;
Qi, Y ;
Scherer, SW ;
Lee, C .
NATURE GENETICS, 2004, 36 (09) :949-951
[9]   Genetic variability in a population of arbuscular mycorrhizal fungi causes variation in plant growth [J].
Koch, AM ;
Croll, D ;
Sanders, IR .
ECOLOGY LETTERS, 2006, 9 (02) :103-110
[10]   High genetic variability and low local diversity in a population of arbuscular mycorrhizal fungi [J].
Koch, AM ;
Kuhn, G ;
Fontanillas, P ;
Fumagalli, L ;
Goudet, J ;
Sanders, IR .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2004, 101 (08) :2369-2374