Filling and emptying kinetics of carbon nanotubes in water

被引:215
作者
Waghe, A [1 ]
Rasaiah, JC
Hummer, G
机构
[1] Univ Maine, Dept Chem, Orono, ME 04469 USA
[2] NIDDK, Chem Phys Lab, NIH, Bethesda, MD 20892 USA
关键词
D O I
10.1063/1.1519861
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The kinetics of water filling and emptying the interior channel of carbon nanotubes is studied by molecular dynamics simulations. Filling and emptying occur predominantly by sequential addition of water to or removal from a single-file chain inside the nanotube. Advancing and receding water chains are orientationally ordered. This precludes simultaneous filling from both tube ends, and forces chain rupturing to occur at the tube end where a water molecule donates a hydrogen bond to the bulk fluid. We use transition path concepts and a Bayesian approach to identify a transition state ensemble that we characterize by its commitment probability distribution. At the transition state, the tube is filled with all but one water molecule. Filling thermodynamics and kinetics depend sensitively on the strength of the attractive nanotube-water interactions. This sensitivity increases with the length of the tubes. (C) 2002 American Institute of Physics.
引用
收藏
页码:10789 / 10795
页数:7
相关论文
共 24 条
[1]   Nanotubes from carbon [J].
Ajayan, PM .
CHEMICAL REVIEWS, 1999, 99 (07) :1787-1799
[2]   A hydrophobic gating mechanism for nanopores [J].
Beckstein, O ;
Biggin, PC ;
Sansom, MSP .
JOURNAL OF PHYSICAL CHEMISTRY B, 2001, 105 (51) :12902-12905
[3]   Single-file transport of water molecules through a carbon nanotube [J].
Berezhkovskii, A ;
Hummer, G .
PHYSICAL REVIEW LETTERS, 2002, 89 (06) :064503/1-064503/4
[4]   Reaction coordinates of biomolecular isomerization [J].
Bolhuis, PG ;
Dellago, C ;
Chandler, D .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2000, 97 (11) :5877-5882
[5]   A 2ND GENERATION FORCE-FIELD FOR THE SIMULATION OF PROTEINS, NUCLEIC-ACIDS, AND ORGANIC-MOLECULES [J].
CORNELL, WD ;
CIEPLAK, P ;
BAYLY, CI ;
GOULD, IR ;
MERZ, KM ;
FERGUSON, DM ;
SPELLMEYER, DC ;
FOX, T ;
CALDWELL, JW ;
KOLLMAN, PA .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1995, 117 (19) :5179-5197
[6]   PARTICLE MESH EWALD - AN N.LOG(N) METHOD FOR EWALD SUMS IN LARGE SYSTEMS [J].
DARDEN, T ;
YORK, D ;
PEDERSEN, L .
JOURNAL OF CHEMICAL PHYSICS, 1993, 98 (12) :10089-10092
[7]   Transition path sampling and the calculation of rate constants [J].
Dellago, C ;
Bolhuis, PG ;
Csajka, FS ;
Chandler, D .
JOURNAL OF CHEMICAL PHYSICS, 1998, 108 (05) :1964-1977
[8]   On the transition coordinate for protein folding [J].
Du, R ;
Pande, VS ;
Grosberg, AY ;
Tanaka, T ;
Shakhnovich, ES .
JOURNAL OF CHEMICAL PHYSICS, 1998, 108 (01) :334-350
[9]   In situ multiphase fluid experiments in hydrothermal carbon nanotubes [J].
Gogotsi, Y ;
Libera, JA ;
Güvenç-Yazicioglu, A ;
Megaridis, CM .
APPLIED PHYSICS LETTERS, 2001, 79 (07) :1021-1023
[10]   Hydrogen bond structure of liquid water confined in nanotubes [J].
Gordillo, MC ;
Martí, J .
CHEMICAL PHYSICS LETTERS, 2000, 329 (5-6) :341-345