Influence of the phenyl side chain on the conformation of cyclopropane analogues of phenylalanine

被引:40
作者
Alemán, C
Jiménez, AI
Cativiela, C
Perez, JJ
Casanovas, J
机构
[1] Univ Lleida, Escola Univ Politecn, Dept Quim, Lleida, Spain
[2] Univ Politecn Cataluna, ETS Engn Ind, Dept Engn Quim, E-08028 Barcelona, Spain
[3] Univ Zaragoza, CSIC, ICMA, Dept Quim Organ, E-50009 Zaragoza, Spain
关键词
D O I
10.1021/jp026381f
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Quantum mechanics methods have been applied to investigate the effects of the selective orientation of the side chains on the conformational features of cyclopropane analogues of phenylalanine. For this purpose, the conformational preferences of the N-acetyl-N'-methylamide derivative of 1-aminocyclopropanecarboxylic acid (Ac(3)c) have been compared to those of two stereoisomers of 1-amino-2-phenylcyclopropanecarboxylic acid: (2S,3S)c(3)Phe and (2S,3R)c(3)Phe. Geometry and vibration frequencies were calculated by the HF, B3LYP, or MP2 methods using the 6-31G(d) basis set, whereas the energy was further evaluated using, in some cases, more sophisticated methods and larger basis sets. Solvent effects were modeled by the self-consistent polarization continuum model with the HF/6-311G(d,p) method. The stereochemistry of the phenyl side chain largely influences the specific backbone...side chain interactions, which in turn affect the stability of the different conformations. Furthermore, results have been compared with recently published experimental data.
引用
收藏
页码:11849 / 11858
页数:10
相关论文
共 61 条
[1]   A QUANTUM-MECHANICAL STUDY OF THE INTRINSIC HELIX-FORMING TENDENCY OF ALPHA-AMINOISOBUTYRIC-ACID AND DEHYDROALANINE RESIDUES [J].
ALEMAN, C .
BIOPOLYMERS, 1994, 34 (07) :841-847
[2]  
Aleman C, 1997, PROTEINS, V28, P83, DOI 10.1002/(SICI)1097-0134(199705)28:1<83::AID-PROT8>3.0.CO
[3]  
2-K
[4]   PAPQMD parametrization of molecular systems with cyclopropyl rings: Conformational study of homopeptides constituted by l-aminocyclopropane-l-carboxylic acid [J].
Aleman, C ;
Casanovas, J ;
Galembeck, SE .
JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN, 1998, 12 (03) :259-273
[5]   Conformational preferences of the asparagine residue. Gas-phase, aqueous solution, and chloroform solution calculations on the model dipeptide [J].
Aleman, C ;
Puiggali, J .
JOURNAL OF PHYSICAL CHEMISTRY B, 1997, 101 (17) :3441-3446
[6]   Conformational properties of alpha-amino acids disubstituted at the alpha-carbon [J].
Aleman, C .
JOURNAL OF PHYSICAL CHEMISTRY B, 1997, 101 (25) :5046-5050
[7]   CONFORMATIONAL-ANALYSIS OF SUCCINAMIDE ANALOGS [J].
ALEMAN, C ;
NAVARRO, E ;
PUIGGALI, J .
JOURNAL OF ORGANIC CHEMISTRY, 1995, 60 (19) :6135-6140
[8]   MOLECULAR CONFORMATIONAL-ANALYSES OF DEHYDROALANINE ANALOGS [J].
ALEMAN, C ;
CASANOVAS, J .
BIOPOLYMERS, 1995, 36 (01) :71-82
[9]   A conformational study of the α-L-aspartate-containing dipeptide [J].
Alemán, C .
JOURNAL OF PHYSICAL CHEMISTRY A, 2000, 104 (32) :7612-7616
[10]   THE DEVELOPMENT OF VERSION-3 AND VERSION-4 OF THE CAMBRIDGE STRUCTURAL DATABASE SYSTEM [J].
ALLEN, FH ;
DAVIES, JE ;
GALLOY, JJ ;
JOHNSON, O ;
KENNARD, O ;
MACRAE, CF ;
MITCHELL, EM ;
MITCHELL, GF ;
SMITH, JM ;
WATSON, DG .
JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 1991, 31 (02) :187-204