A higher-level phylogenetic classification of the Fungi

被引:1520
作者
Hibbett, David S. [1 ]
Binder, Manfred
Bischoff, Joseph F.
Blackwell, Meredith
Cannon, Paul F.
Eriksson, Ove E.
Huhndorf, Sabine
James, Timothy
Kirk, Paul M.
Luecking, Robert
Lumbsch, H. Thorsten
Lutzoni, Francois
Matheny, P. Brandon
Mclaughlin, David J.
Powell, Martha J.
Redhead, Scott
Schoch, Conrad L.
Spatafora, Joseph W.
Stalpers, Joost A.
Vilgalys, Rytas
Aime, M. Catherine
Aptroot, Andre
Bauer, Robert
Begerow, Dominik
Benny, Gerald L.
Castlebury, Lisa A.
Crous, Pedro W.
Dai, Yu-Cheng
Gams, Walter
Geiser, David M.
Griffith, Gareth W.
Gueidan, Cecile
Hawksworth, David L.
Hestmark, Geir
Hosaka, Kentaro
Humber, Richard A.
Hyde, Kevin D.
Ironside, Joseph E.
Koljalg, Urmas
Kurtzman, Cletus P.
Larsson, Karl-Henrik
Lichtwardt, Robert
Longcore, Joyce
Miadlikowska, Jolanta
Miller, Andrew
Moncalvo, Jean-Marc
Mozley-Standridge, Sharon
Oberwinkler, Franz
Parmasto, Erast
Reeb, Valerie
机构
[1] Clark Univ, Dept Biol, Worcester, MA 01610 USA
[2] Natl Ctr Biotechnol Informat, Natl Lib Med, Bethesda, MD 20892 USA
[3] Louisiana State Univ, Dept Biol Sci, Baton Rouge, LA 70803 USA
[4] CABI UK, Surrey TW20 9TY, England
[5] Umea Univ, Dept Ecol & Environm Sci, S-90187 Umea, Sweden
[6] Field Museum Nat Hist, Dept Bot, Chicago, IL 60605 USA
[7] Duke Univ, Dept Biol, Durham, NC 27708 USA
[8] Univ Minnesota, Dept Plant Biol, St Paul, MN 55108 USA
[9] Univ Alabama, Dept Biol Sci, Tuscaloosa, AL 35487 USA
[10] ECORC, Agr & Agri Food Canada, Ottawa, ON K1A 0C6, Canada
[11] Oregon State Univ, Dept Bot & Plant Pathol, Corvallis, OR 97331 USA
[12] Cent Bur Schimmelcultures, NL-3584 CT Utrecht, Netherlands
[13] USDA ARS, Systemat Bot & Mycol Lab, Beltsville, MD 20705 USA
[14] ABL, Herbarium, NL-3762 XK Soest, Netherlands
[15] Univ Tubingen, Inst Bot, D-72076 Tubingen, Germany
[16] Max Planck Inst Terr Microbiol, D-35043 Marburg, Germany
[17] Univ Florida, Dept Plant Pathol, Gainesville, FL 32611 USA
[18] Chinese Acad Sci, Inst Appl Ecol, Shenyang 110016, Peoples R China
[19] Penn State Univ, Dept Plant Pathol, University Pk, PA 16802 USA
[20] Univ Wales, Inst Biol Sci, Aberystwyth SY23 3DA, Dyfed, Wales
[21] Univ Complutense Madrid, Fac Farm, Dept Biol Vegetal 2, E-28040 Madrid, Spain
[22] Univ Oslo, Dept Biol, N-0316 Oslo, Norway
[23] Field Museum Nat Hist, Dept Bot, Chicago, IL 60605 USA
[24] USDA ARS, Plant Protect Res Unit, US Plant Soil & Nutr Lab, Ithaca, NY 14853 USA
[25] Univ Hong Kong, Dept Ecol & Biodivers, Ctr Res Fungal Divers, Hong Kong, Hong Kong, Peoples R China
[26] Univ Tartu, Inst Bot & Ecol, EE-51005 Tartu, Estonia
[27] USDA ARS, Natl Ctr Agr Utilizat Res, Peoria, IL 61604 USA
[28] Univ Gothenburg, Dept Plant & Environm Sci, SE-40530 Gothenburg, Sweden
[29] Univ Kansas, Dept Ecol & Evolutionary Biol, Lawrence, KS 66045 USA
[30] Univ Maine, Dept Biol Sci, Orono, ME 04469 USA
[31] Illinois Nat Hist Survey, Ctr Biodivers, Champaign, IL 61820 USA
[32] Royal Ontario Museum, Ctr Biodivers & Conservat Biol, Toronto, ON M5S 2C6, Canada
[33] Middle Georgia Coll, Div Nat Sci Math & Engn, Cochran, GA 31014 USA
[34] Estonian Univ Life Sci, Inst Agr & Environm Sci, EE-51014 Tartu, Estonia
[35] Washington State Univ, Dept Plant Pathol, Pullman, WA 99164 USA
[36] Chemin Vignes Vielles, F-84120 Mirabeau, France
[37] Univ Oslo, Bot Inst, N-0316 Oslo, Norway
[38] Univ Nova Lisboa, Fac Ciencias & Tecnol, SABT, CREM, P-2829516 Caparica, Portugal
[39] Univ Munich, Dept Biol 1, Inst Genet, D-80638 Munich, Germany
[40] TechnoSuruga Co Ltd, Tokyo Off, Chiyoda Ku, Tokyo 1010052, Japan
[41] Univ Western Ontario, Dept Biol, London, ON N6A 5B7, Canada
[42] Uppsala Univ, Evolut Biol Ctr, Dept Systemat Bot, SE-75236 Uppsala, Sweden
[43] Brandon Univ, Dept Bot, Brandon, MB R7A 6A9, Canada
[44] Royal Bot Gardens, Edinburgh EH3 5LR, Midlothian, Scotland
[45] SUNY Coll, Fac Environm & Forest Biol, Syracuse, NY 13210 USA
[46] Boise State Univ, Dept Biol, Boise, ID 83725 USA
[47] Chinese Acad Sci, Inst Microbiol, Systmat Mycol & Lichenol Lab, Beijing 100080, Peoples R China
[48] Cornell Univ, Dept Plant Pathol, Geneva, NY 14456 USA
来源
MYCOLOGICAL RESEARCH | 2007年 / 111卷
基金
美国国家科学基金会;
关键词
D O I
10.1016/j.mycres.2007.03.004
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A comprehensive phylogenetic classification of the kingdom Fungi is proposed, with reference to recent molecular phylogenetic analyses, and with input from diverse members of the fungal taxonomic community. The classification includes 195 taxa, down to the level of order, of which 16 are described or validated here: Dikarya subkingdom nov.; Chytridiomycota, Neocallimastigomycota phyla nov.; Monoblepharidomycetes, Neocallimastigomycetes class. nov.; Eurotiomycetidae, Lecarioromycetidae, Mycocaliciomycetidae subclass. nov.; Acarosporales, Corticiales, Baeomycetales, Candelariales, Gloeophyllales, Melanosporales, Trechisporales, Umbilicariales ords. nov. The clade containing Ascomycota and Basidiomycota is classified as subkingdom Dikarya, reflecting the putative synapomorphy of dikaryotic hyphae. The most dramatic shifts in the classification relative to previous works concern the groups that have traditionally been included in the Chytridiomycota and Zygomycota. The Chytridiomycota is retained in a restricted sense, with Blastocladiomycota and Neocallimastigomycota representing segregate phyla of flagellated Fungi. Taxa traditionally placed in Zygomycota are distributed among Glomeromycota and several subphyla incertae sedis, including Mucoromycotina, Entomophthoromycotina, Kickxellomycotina, and Zoopagomycotiria. Microsporidia are included in the Fungi, but no further subdivision of the group is proposed. Several genera of 'basal' Fungi of uncertain position are not placed in any higher taxa, including Basidiobolus, Caulochytrium, Olpidium, and Rozella. (c) 2007 The British Mycological Society. Published by Elsevier Ltd. All rights reserved.
引用
收藏
页码:509 / 547
页数:39
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