Continuum simulations of acetylcholine diffusion with reaction-determined boundaries in neuromuscular junction models

被引:27
作者
Cheng, Yuhui
Suen, Jason K.
Radic, Zoran
Bond, Stephen D.
Holst, Michael J.
McCammon, J. Andrew
机构
[1] Univ Calif San Diego, Dept Chem & Biochem, Ctr Theoret Biol Phys, Natl Biomed Computat Resource, La Jolla, CA 92093 USA
[2] Univ Calif San Diego, Howard Hughes Med Inst, La Jolla, CA 92093 USA
[3] Univ Calif San Diego, Dept Pharmacol, La Jolla, CA 92093 USA
[4] Univ Calif San Diego, Dept Math, La Jolla, CA 92093 USA
[5] Univ Illinois, Dept Comp Sci, Urbana, IL 61801 USA
关键词
finite element method; synaptic transmission; substrate inhibition; reaction-determined boundaries; TRANSMITTER RELEASE; SYNAPTIC-TRANSMISSION; TIME-COURSE; CALCIUM DIFFUSION; RECEPTOR CHANNELS; BINDING; ACTIVATION; PARAMETERS;
D O I
10.1016/j.bpc.2007.01.003
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The reaction-diffusion system of the neuromuscular junction has been modeled in 3D using the finite element package FEtk. The numerical solution of the dynamics of acetylcholine with the detailed reaction processes of acetylcholinesterases and nicotinic acetylcholine receptors has been discussed with the reaction-determined boundary conditions. The simulation results describe the detailed acetylcholine hydrolysis process, and reveal the time-dependent interconversion of the closed and open states of the acetylcholine receptors as well as the percentages of unliganded/monoliganded/diliganded states during the neuro-transmission. The finite element method has demonstrated its flexibility and robustness in modeling large biological systems. (c) 2007 Elsevier B.V. All rights reserved.
引用
收藏
页码:129 / 139
页数:11
相关论文
共 57 条
[1]  
Aharon S, 1996, B MATH BIOL, V58, P1075
[2]   Activation of muscle nicotinic acetylcholine receptor channels by nicotinic and muscarinic agonists [J].
Akk, G ;
Auerbach, A .
BRITISH JOURNAL OF PHARMACOLOGY, 1999, 128 (07) :1467-1476
[3]  
Axelsson O., 1984, Finite Element Solution of Boundary Value Problems: Theory and Computation
[4]   A simple model of transmitter release and facilitation [J].
Bertram, R .
NEURAL COMPUTATION, 1997, 9 (03) :515-523
[5]   Single-domain/bound calcium hypothesis of transmitter release and facilitation [J].
Bertram, R ;
Sherman, A ;
Stanley, EF .
JOURNAL OF NEUROPHYSIOLOGY, 1996, 75 (05) :1919-1931
[6]   Structural insights into ligand interactions at the acetylcholinesterase peripheral anionic site [J].
Bourne, Y ;
Taylor, P ;
Radic, Z ;
Marchot, P .
EMBO JOURNAL, 2003, 22 (01) :1-12
[7]  
Braess D., 1997, FINITE ELEMENTS
[8]  
CHENG YH, IN PRESS BIOPHYS J
[9]   Evidence for ectopic neurotransmission at a neuronal synapse [J].
Coggan, JS ;
Bartol, TM ;
Esquenazi, E ;
Stiles, JR ;
Lamont, S ;
Martone, ME ;
Berg, DK ;
Ellisman, MH ;
Sejnowski, TJ .
SCIENCE, 2005, 309 (5733) :446-451
[10]   Synaptic structural complexity as a factor enhancing probability of calcium-mediated transmitter release [J].
Cooper, RL ;
Winslow, JL ;
Govind, CK ;
Atwood, HL .
JOURNAL OF NEUROPHYSIOLOGY, 1996, 75 (06) :2451-2466