A cold-adapted esterase of a novel marine isolate, Pseudoalteromonas arctica: gene cloning, enzyme purification and characterization

被引:50
作者
Al Khudary, Rami [2 ]
Venkatachalam, Ramprasath [1 ,2 ]
Katzer, Moritz [1 ,2 ]
Elleuche, Skander [1 ,2 ]
Antranikian, Garabed [1 ,2 ]
机构
[1] Hamburg Univ Technol TUHH, Inst Tech Microbiol, D-21073 Hamburg, Germany
[2] Hamburg Univ Technol TUHH, Inst Tech Microbiol, D-21073 Hamburg, Germany
关键词
Esterase; Psychrophilic enzyme; Pseudoalteromonas arctica; OsmC; ALPHA/BETA-HYDROLASE FOLD; LIPOLYTIC ENZYME; HALOPLANKTIS TAC125; ACTIVE ESTERASE; STRAIN B11-1; EXPRESSION; LIPASE; PROTEINS; CLASSIFICATION; PSYCHROTROPH;
D O I
10.1007/s00792-010-0306-7
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A gene encoding an esterase (estO) was identified and sequenced from a gene library screen of the psychrotolerant bacterium Pseudoalteromonas arctica. Analysis of the 1,203 bp coding region revealed that the deduced peptide sequence is composed of 400 amino acids with a predicted molecular mass of 44.1 kDa. EstO contains a N-terminal esterase domain and an additional OsmC domain at the C-terminus (osmotically induced family of proteins). The highly conserved five-residue motif typical for all alpha/beta hydrolases (G x S x G) was detected from position 104 to 108 together with a putative catalytic triad consisting of Ser(106), Asp(196), and His(225). Sequence comparison showed that EstO exhibits 90% amino acid identity with hypothetical proteins containing similar esterase and OsmC domains but only around 10% identity to the amino acid sequences of known esterases. EstO variants with and without the OsmC domain were produced and purified as His-tag fusion proteins in E. coli. EstO displayed an optimum pH of 7.5 and optimum temperature of 25A degrees C with more than 50% retained activity at the freezing point of water. The thermostability of EstO (50% activity after 5 h at 40A degrees C) dramatically increased in the truncated variant (50% activity after 2.5 h at 90A degrees C). Furthermore, the esterase displays broad substrate specificity for esters of short-chain fatty acids (C-2-C-8).
引用
收藏
页码:273 / 285
页数:13
相关论文
共 58 条
[31]   CLEAVAGE OF STRUCTURAL PROTEINS DURING ASSEMBLY OF HEAD OF BACTERIOPHAGE-T4 [J].
LAEMMLI, UK .
NATURE, 1970, 227 (5259) :680-+
[32]   Characterization and structural modeling of a new type of thermostable esterase from Thermotoga maritima [J].
Levisson, Mark ;
van der Oost, John ;
Kengen, Serve W. M. .
FEBS JOURNAL, 2007, 274 (11) :2832-2842
[33]   Carboxylic ester hydrolases from hyperthermophiles [J].
Levisson, Mark ;
van der Oost, John ;
Kengen, Serve W. M. .
EXTREMOPHILES, 2009, 13 (04) :567-581
[34]   Covalent reaction intermediate revealed in crystal structure of the Geobacillus stearothermophilus carboxylesterase Est30 [J].
Liu, P ;
Wang, YF ;
Ewis, HE ;
Abdelal, AT ;
Lu, CD ;
Harrison, RW ;
Weber, IT .
JOURNAL OF MOLECULAR BIOLOGY, 2004, 342 (02) :551-561
[35]   Correlations between Shine-Dalgarno sequences and gene features such as predicted expression levels and operon structures [J].
Ma, J ;
Campbell, A ;
Karlin, S .
JOURNAL OF BACTERIOLOGY, 2002, 184 (20) :5733-5745
[36]   PROPERTIES OF COLD-ADAPTED MICROORGANISMS AND THEIR POTENTIAL ROLE IN BIOTECHNOLOGY [J].
MARGESIN, R ;
SCHINNER, F .
JOURNAL OF BIOTECHNOLOGY, 1994, 33 (01) :1-14
[37]   Cold-adapted enzymes from marine antarctic microorganisms [J].
Marx, J-C. ;
Collins, T. ;
D'Amico, S. ;
Feller, G. ;
Gerday, C. .
MARINE BIOTECHNOLOGY, 2007, 9 (03) :293-304
[38]   The PSIPRED protein structure prediction server [J].
McGuffin, LJ ;
Bryson, K ;
Jones, DT .
BIOINFORMATICS, 2000, 16 (04) :404-405
[39]   Coping with cold:: The genome of the versatile marine Antarctica bacterium Pseudoalteromonas haloplanktis TAC125 [J].
Médigue, C ;
Krin, E ;
Pascal, G ;
Barbe, V ;
Bernsel, A ;
Bertin, PN ;
Cheung, F ;
Cruveiller, S ;
D'Amico, S ;
Duilio, A ;
Fang, G ;
Feller, G ;
Ho, C ;
Mangenot, S ;
Marino, G ;
Nilsson, J ;
Parrilli, E ;
Rocha, EPC ;
Rouy, Z ;
Sekowska, A ;
Tutino, ML ;
Vallenet, D ;
von Heijne, G ;
Danchin, A .
GENOME RESEARCH, 2005, 15 (10) :1325-1335
[40]   Characterization of esterase activity in Geobacillus sp HBB-4 [J].
Metin, Kubilay ;
Ateslier, Z. Burcu Bakir ;
Basbulbul, Gamze ;
Biyik, H. Halil .
JOURNAL OF BASIC MICROBIOLOGY, 2006, 46 (05) :400-409