The IBD2 locus shows linkage heterogeneity between ulcerative colitis and Crohn disease

被引:71
作者
Parkes, M
Barmada, MM
Satsangi, J
Weeks, DE
Jewell, DP
Duerr, RH
机构
[1] Univ Oxford, Radcliffe Infirm, Nuffield Dept Med, Gastroenterol Unit, Oxford OX2 6HE, England
[2] Univ Oxford, Wellcome Trust Ctr Human Genet, Oxford OX2 6HE, England
[3] Univ Pittsburgh, Grad Sch Publ Hlth, Dept Human Genet, Pittsburgh, PA 15261 USA
[4] Univ Pittsburgh, Sch Med, Dept Med, Pittsburgh, PA 15261 USA
[5] Univ Pittsburgh, Sch Med, Dept Genom Sci, Pittsburgh, PA 15261 USA
关键词
D O I
10.1086/316905
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The IBD2 locus on chromosome 12 has been Linked to both Crohn disease (CD) and ulcerative colitis (UC) but has not been detected in some CD-dominated data sets. In the present study, we genotyped 581 relative pairs with inflammatory bowel disease (252 from CD-only families, 138 from UC-only families, and 191 from mixed families containing cases of both CD and UC), using 12 markers spanning the IBD2 locus. A GENEHUNTER-PLUS multipoint LOD score of 3.91 was detected for pairs from UC-only families, compared with 1.66 for CD-only and 1.29 for mixed families. The difference between the LOD scores for UC and CD was significant in two different tests for heterogeneity (P =.0057 for one test and P =.0375 for the other). IBD2 thus appears to make a major contribution to UC susceptibility but to have only a relatively minor effect with regard to CD, for which there may be substantially more locus heterogeneity.
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页码:1605 / 1610
页数:6
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