The C-value enigma in plants and animals: A review of parallels and an appeal for partnership

被引:194
作者
Gregory, TR [1 ]
机构
[1] Nat Hist Museum, Dept Entomol, London SW7 5BD, England
关键词
body size; cell size; complexity; C-value enigma; C-value paradox; database; development; DNA content; genome size; introns; physiology; selfish DNA; sequencing; transposable elements;
D O I
10.1093/aob/mci009
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Aims Plants and animals represent the first two kingdoms recognized, and remain the two best-studied groups, in terms of nuclear DNA content variation. Unfortunately. the traditional chasm between botanists and zoologists has done much to prevent an integrated approach to resolving the C-value enigma, the long-standing puzzle surrounding the evolution of genome size. This grand division is both unnecessary and counterproductive. and the present review, aims to illustrate the numerous links between the patterns and processes found in plants and animals so that a stronger unity can be developed in the future. Scope This review discusses the numerous parallels that exist in genome size evolution between plants and animals, including (i) the construction of large databases, (ii) the patterns of DNA content variation among taxa (iii) the cytological, morphological, physiological and evolutionary impacts of genome size. (iv) the mechanisms by which genomes change in size, and (v) the development of new methodologies for estimating DNA contents. Conclusions The fundamental questions of the C-value enigma clearly transcend taxonomic boundaries. and increased communication is therefore urged among those who study genome size evolution. whether in plants, animals or other organisms. (C) 2005 Annals of Botany Company.
引用
收藏
页码:133 / 146
页数:14
相关论文
共 171 条
[1]   The genome sequence of Drosophila melanogaster [J].
Adams, MD ;
Celniker, SE ;
Holt, RA ;
Evans, CA ;
Gocayne, JD ;
Amanatides, PG ;
Scherer, SE ;
Li, PW ;
Hoskins, RA ;
Galle, RF ;
George, RA ;
Lewis, SE ;
Richards, S ;
Ashburner, M ;
Henderson, SN ;
Sutton, GG ;
Wortman, JR ;
Yandell, MD ;
Zhang, Q ;
Chen, LX ;
Brandon, RC ;
Rogers, YHC ;
Blazej, RG ;
Champe, M ;
Pfeiffer, BD ;
Wan, KH ;
Doyle, C ;
Baxter, EG ;
Helt, G ;
Nelson, CR ;
Miklos, GLG ;
Abril, JF ;
Agbayani, A ;
An, HJ ;
Andrews-Pfannkoch, C ;
Baldwin, D ;
Ballew, RM ;
Basu, A ;
Baxendale, J ;
Bayraktaroglu, L ;
Beasley, EM ;
Beeson, KY ;
Benos, PV ;
Berman, BP ;
Bhandari, D ;
Bolshakov, S ;
Borkova, D ;
Botchan, MR ;
Bouck, J ;
Brokstein, P .
SCIENCE, 2000, 287 (5461) :2185-2195
[2]  
[Anonymous], PLANT DNA C VALUES D
[3]  
[Anonymous], 2002, ANIMAL GENOME SIZE D
[4]  
[Anonymous], 1998, SCIENCE, V282, P2012
[5]   Whole-genome shotgun assembly and analysis of the genome of Fugu rubripes [J].
Aparicio, S ;
Chapman, J ;
Stupka, E ;
Putnam, N ;
Chia, J ;
Dehal, P ;
Christoffels, A ;
Rash, S ;
Hoon, S ;
Smit, A ;
Gelpke, MDS ;
Roach, J ;
Oh, T ;
Ho, IY ;
Wong, M ;
Detter, C ;
Verhoef, F ;
Predki, P ;
Tay, A ;
Lucas, S ;
Richardson, P ;
Smith, SF ;
Clark, MS ;
Edwards, YJK ;
Doggett, N ;
Zharkikh, A ;
Tavtigian, SV ;
Pruss, D ;
Barnstead, M ;
Evans, C ;
Baden, H ;
Powell, J ;
Glusman, G ;
Rowen, L ;
Hood, L ;
Tan, YH ;
Elgar, G ;
Hawkins, T ;
Venkatesh, B ;
Rokhsar, D ;
Brenner, S .
SCIENCE, 2002, 297 (5585) :1301-1310
[6]   Analysis of the genome sequence of the flowering plant Arabidopsis thaliana [J].
Kaul, S ;
Koo, HL ;
Jenkins, J ;
Rizzo, M ;
Rooney, T ;
Tallon, LJ ;
Feldblyum, T ;
Nierman, W ;
Benito, MI ;
Lin, XY ;
Town, CD ;
Venter, JC ;
Fraser, CM ;
Tabata, S ;
Nakamura, Y ;
Kaneko, T ;
Sato, S ;
Asamizu, E ;
Kato, T ;
Kotani, H ;
Sasamoto, S ;
Ecker, JR ;
Theologis, A ;
Federspiel, NA ;
Palm, CJ ;
Osborne, BI ;
Shinn, P ;
Conway, AB ;
Vysotskaia, VS ;
Dewar, K ;
Conn, L ;
Lenz, CA ;
Kim, CJ ;
Hansen, NF ;
Liu, SX ;
Buehler, E ;
Altafi, H ;
Sakano, H ;
Dunn, P ;
Lam, B ;
Pham, PK ;
Chao, Q ;
Nguyen, M ;
Yu, GX ;
Chen, HM ;
Southwick, A ;
Lee, JM ;
Miranda, M ;
Toriumi, MJ ;
Davis, RW .
NATURE, 2000, 408 (6814) :796-815
[7]  
Averett JE, 1980, Polyploidy, P269, DOI 10.1007/978-1-4613-3069-1_15
[8]  
BEATON MJ, 1995, THESIS U GUELPH DEP
[9]   Allium cepa L. cultivars from four continents compared by flow cytometry show nuclear DNA constancy [J].
Bennett, MD ;
Johnston, S ;
Hodnett, GL ;
Price, HJ .
ANNALS OF BOTANY, 2000, 85 (03) :351-357
[10]   DNA amounts in two samples of angiosperm weeds [J].
Bennett, MD ;
Leitch, IJ ;
Hanson, L .
ANNALS OF BOTANY, 1998, 82 :121-134