Crystal structure of human phosphoglucose isomerase and analysis of the initial catalytic steps

被引:27
作者
Cordeiro, AT
Godoi, PHC
Silva, CHTP
Garratt, RC
Oliva, G
Thiemann, OH
机构
[1] Univ Sao Paulo, Lab Prot Crystallog & Struct Biol, Phys Inst Sao Carlos, BR-13566590 Sao Carlos, SP, Brazil
[2] Univ Sao Paulo, Chem Inst Sao Carlos, BR-13566590 Sao Carlos, SP, Brazil
来源
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS | 2003年 / 1645卷 / 02期
基金
巴西圣保罗研究基金会;
关键词
human phosphoglucose isomerase; glycolysis; isomerization mechanism;
D O I
10.1016/S1570-9639(02)00464-8
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The second enzyme in the glycolytic pathway, phosphoglucose isomerase (M), catalyses an intracellular aldose-ketose isomerization. Here we describe the human recombinant PGI structure (hPGI) solved in the absence of active site ligands. Crystals isomorphous to those previously reported were used to collect a 94% complete data set to a limiting resolution of 2.1 Angstrom. From the comparison between the free active site hPGl structure and the available human and rabbit PGI (rPGI) structures, a mechanism for protein initial catalytic steps is proposed. Binding of the phosphate moiety of the substrate to two distinct elements of the active site is responsible for driving a series of structural changes resulting in the polarisation of the active site histidine, priming it for the initial ring-opening step of catalysis. (C) 2002 Elsevier Science B.V All rights reserved.
引用
收藏
页码:117 / 122
页数:6
相关论文
共 18 条
[1]   The crystal structure of rabbit phosphoglucose isomerase complexed with 5-phospho-D-arabinonohydroxamic acid [J].
Arsenieva, D ;
Hardré, R ;
Salmon, L ;
Jeffery, CJ .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (09) :5872-5877
[2]  
BAUGHAN MA, 1968, BLOOD, V32, P249
[3]   Crystallography & NMR system:: A new software suite for macromolecular structure determination [J].
Brunger, AT ;
Adams, PD ;
Clore, GM ;
DeLano, WL ;
Gros, P ;
Grosse-Kunstleve, RW ;
Jiang, JS ;
Kuszewski, J ;
Nilges, M ;
Pannu, NS ;
Read, RJ ;
Rice, LM ;
Simonson, T ;
Warren, GL .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1998, 54 :905-921
[4]   Human phosphoglucose isomerase: expression, purification, crystallization and preliminary crystallographic analysis [J].
Cordeiro, AT ;
Godoi, PHC ;
Delboni, LF ;
Oliva, G ;
Thiemann, OH .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2001, 57 :592-595
[5]   MOLECULAR-CLONING AND EXPRESSION OF NEUROLEUKIN, A NEUROTROPHIC FACTOR FOR SPINAL AND SENSORY NEURONS [J].
GURNEY, ME ;
HEINRICH, SP ;
LEE, MR ;
YIN, HS .
SCIENCE, 1986, 234 (4776) :566-574
[6]   The allosteric transition of glucosamine-6-phosphate deaminase:: The structure of the T state at 2.3 Å resolution [J].
Horjales, E ;
Altamirano, MM ;
Calcagno, ML ;
Garratt, RC ;
Oliva, G .
STRUCTURE, 1999, 7 (05) :527-537
[7]   Crystal structure of rabbit phosphoglucose isomerase, a glycolytic enzyme that moonlights as neuroleukin, autocrine motility factor, and differentiation mediator [J].
Jeffery, CJ ;
Bahnson, BJ ;
Chien, W ;
Ringe, D ;
Petsko, A .
BIOCHEMISTRY, 2000, 39 (05) :955-964
[8]   Crystal structure of rabbit phosphoglucose isomerase complexed with 5-phospho-D-arabinonate identifies the role of Glu357 in catalysis [J].
Jeffery, CJ ;
Hardré, R ;
Salmon, L .
BIOCHEMISTRY, 2001, 40 (06) :1560-1566
[9]   IMPROVED METHODS FOR BUILDING PROTEIN MODELS IN ELECTRON-DENSITY MAPS AND THE LOCATION OF ERRORS IN THESE MODELS [J].
JONES, TA ;
ZOU, JY ;
COWAN, SW ;
KJELDGAARD, M .
ACTA CRYSTALLOGRAPHICA SECTION A, 1991, 47 :110-119
[10]   DICTIONARY OF PROTEIN SECONDARY STRUCTURE - PATTERN-RECOGNITION OF HYDROGEN-BONDED AND GEOMETRICAL FEATURES [J].
KABSCH, W ;
SANDER, C .
BIOPOLYMERS, 1983, 22 (12) :2577-2637